Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1067 | DR97_1068 | DR97_1067 | DR97_1068 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.687 |
DR97_1068 | DR97_1067 | DR97_1068 | DR97_1067 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.687 |
DR97_1068 | DR97_1069 | DR97_1068 | DR97_1069 | annotation not available | Hypothetical protein; DUF2790 domain-containing protein | 0.593 |
DR97_1068 | DR97_3972 | DR97_1068 | DR97_3972 | annotation not available | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.709 |
DR97_1068 | DR97_3974 | DR97_1068 | DR97_3974 | annotation not available | Hypothetical protein; DUF1656 domain-containing protein | 0.818 |
DR97_1068 | DR97_3975 | DR97_1068 | DR97_3975 | annotation not available | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.857 |
DR97_1068 | DR97_4627 | DR97_1068 | DR97_4627 | annotation not available | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.726 |
DR97_1068 | DR97_6003 | DR97_1068 | DR97_6003 | annotation not available | Uncharacterized protein; RND_mfp: efflux transporter, RND family, MFP subunit | 0.683 |
DR97_1068 | DR97_703 | DR97_1068 | DR97_703 | annotation not available | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.707 |
DR97_1068 | YhhS | DR97_1068 | DR97_5854 | annotation not available | annotation not available | 0.653 |
DR97_1068 | opdP | DR97_1068 | DR97_1680 | annotation not available | annotation not available | 0.437 |
DR97_1069 | DR97_1068 | DR97_1069 | DR97_1068 | Hypothetical protein; DUF2790 domain-containing protein | annotation not available | 0.593 |
DR97_1069 | opdP | DR97_1069 | DR97_1680 | Hypothetical protein; DUF2790 domain-containing protein | annotation not available | 0.426 |
DR97_3972 | DR97_1068 | DR97_3972 | DR97_1068 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | annotation not available | 0.709 |
DR97_3972 | DR97_3974 | DR97_3972 | DR97_3974 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Hypothetical protein; DUF1656 domain-containing protein | 0.945 |
DR97_3972 | DR97_3975 | DR97_3972 | DR97_3975 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.920 |
DR97_3972 | DR97_4627 | DR97_3972 | DR97_4627 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.522 |
DR97_3972 | DR97_6003 | DR97_3972 | DR97_6003 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Uncharacterized protein; RND_mfp: efflux transporter, RND family, MFP subunit | 0.616 |
DR97_3972 | DR97_703 | DR97_3972 | DR97_703 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | Efflux transporter, rnd family, mfp subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.520 |
DR97_3972 | YhhS | DR97_3972 | DR97_5854 | Fusaric acid resistance protein fusA; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | annotation not available | 0.400 |
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