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pbpG protein (Pseudomonas aeruginosa) - STRING interaction network
"pbpG" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpGannotation not available (310 aa)    
Predicted Functional Partners:
dacB
PBP4- D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (476 aa)
       
 
  0.875
mrcA
PBP_1a_fam- penicillin-binding , 1A family protein (823 aa)
           
  0.792
carA
CPSaseIIsmall- carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family (378 aa)
           
  0.732
DR97_2857
annotation not available (409 aa)
         
  0.688
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (646 aa)
   
 
  0.685
gph2
PGP_bact- phosphoglycolate phosphatase, bacterial (223 aa)
     
   
  0.566
pbpC
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (565 aa)
   
 
  0.561
DR97_1596
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (579 aa)
   
 
  0.561
mltB3
mltB- lytic murein transglycosylase B (367 aa)
 
          0.552
ampD
annotation not available (188 aa)
   
     
  0.551
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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