Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1185 | DR97_262 | DR97_1185 | DR97_262 | annotation not available | annotation not available | 0.453 |
DR97_1185 | DR97_5151 | DR97_1185 | DR97_5151 | annotation not available | annotation not available | 0.532 |
DR97_1185 | acnD | DR97_1185 | DR97_1188 | annotation not available | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | 0.682 |
DR97_1185 | bphP | DR97_1185 | DR97_3754 | annotation not available | Putative bacteriophytochrome; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region | 0.485 |
DR97_1185 | pmtA | DR97_1185 | DR97_1184 | annotation not available | annotation not available | 0.564 |
DR97_1185 | prpB | DR97_1185 | DR97_1186 | annotation not available | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate | 0.946 |
DR97_1185 | prpC | DR97_1185 | DR97_1187 | annotation not available | 2-methylcitrate synthase/citrate synthase II family protein; Belongs to the citrate synthase family | 0.774 |
DR97_1185 | prpD | DR97_1185 | DR97_1191 | annotation not available | prpD: 2-methylcitrate dehydratase | 0.463 |
DR97_1185 | prpF | DR97_1185 | DR97_1189 | annotation not available | prpF: putative AcnD-accessory protein PrpF | 0.755 |
DR97_262 | DR97_1185 | DR97_262 | DR97_1185 | annotation not available | annotation not available | 0.453 |
DR97_262 | DR97_5151 | DR97_262 | DR97_5151 | annotation not available | annotation not available | 0.511 |
DR97_5151 | DR97_1185 | DR97_5151 | DR97_1185 | annotation not available | annotation not available | 0.532 |
DR97_5151 | DR97_262 | DR97_5151 | DR97_262 | annotation not available | annotation not available | 0.511 |
acnD | DR97_1185 | DR97_1188 | DR97_1185 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | annotation not available | 0.682 |
acnD | prpB | DR97_1188 | DR97_1186 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate | 0.893 |
acnD | prpC | DR97_1188 | DR97_1187 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | 2-methylcitrate synthase/citrate synthase II family protein; Belongs to the citrate synthase family | 0.999 |
acnD | prpD | DR97_1188 | DR97_1191 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | prpD: 2-methylcitrate dehydratase | 0.991 |
acnD | prpF | DR97_1188 | DR97_1189 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming); Aconitate hydratase; 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent | prpF: putative AcnD-accessory protein PrpF | 0.998 |
bphP | DR97_1185 | DR97_3754 | DR97_1185 | Putative bacteriophytochrome; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region | annotation not available | 0.485 |
pmtA | DR97_1185 | DR97_1184 | DR97_1185 | annotation not available | annotation not available | 0.564 |
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