STRINGSTRING
ahdIC protein (Pseudomonas aeruginosa) - STRING interaction network
"ahdIC" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahdICannotation not available (99 aa)    
Predicted Functional Partners:
DR97_1259
annotation not available (208 aa)
 
          0.913
DR97_1264
Conserved hypothetical protein (122 aa)
    
          0.725
DR97_1320
annotation not available (252 aa)
    
          0.709
DR97_1306
Uncharacterized protein (130 aa)
    
          0.703
DR97_1266
Uncharacterized protein (117 aa)
    
          0.701
DR97_5566
Uncharacterized protein ORF C93 (130 aa)
    
          0.686
DR97_1304
GTPase (265 aa)
    
          0.667
DR97_5582
annotation not available (248 aa)
    
          0.659
DR97_5518
annotation not available (119 aa)
    
          0.642
DR97_1271
annotation not available (247 aa)
    
          0.641
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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