Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2136 | DR97_6021 | DR97_2136 | DR97_6021 | annotation not available | annotation not available | 0.580 |
DR97_2136 | DR97_6022 | DR97_2136 | DR97_6022 | annotation not available | annotation not available | 0.531 |
DR97_2136 | FixR | DR97_2136 | DR97_2517 | annotation not available | annotation not available | 0.529 |
DR97_2136 | opmQ | DR97_2136 | DR97_6041 | annotation not available | Uncharacterized protein; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.463 |
DR97_2136 | pvdG | DR97_2136 | DR97_6008 | annotation not available | annotation not available | 0.551 |
DR97_2136 | pvdL | DR97_2136 | DR97_6009 | annotation not available | Uncharacterized protein; D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 | 0.521 |
DR97_2136 | pvdR | DR97_2136 | DR97_6043 | annotation not available | Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.440 |
DR97_2136 | toxR | DR97_2136 | DR97_1410 | annotation not available | Exotoxin a regulatory protein; Positive regulation of toxA gene transcription | 0.472 |
DR97_6021 | DR97_2136 | DR97_6021 | DR97_2136 | annotation not available | annotation not available | 0.580 |
DR97_6021 | DR97_6022 | DR97_6021 | DR97_6022 | annotation not available | annotation not available | 0.986 |
DR97_6021 | DR97_6039 | DR97_6021 | DR97_6039 | annotation not available | annotation not available | 0.576 |
DR97_6021 | FixR | DR97_6021 | DR97_2517 | annotation not available | annotation not available | 0.556 |
DR97_6021 | opmQ | DR97_6021 | DR97_6041 | annotation not available | Uncharacterized protein; outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein | 0.544 |
DR97_6021 | pvdG | DR97_6021 | DR97_6008 | annotation not available | annotation not available | 0.940 |
DR97_6021 | pvdL | DR97_6021 | DR97_6009 | annotation not available | Uncharacterized protein; D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 | 0.954 |
DR97_6021 | pvdR | DR97_6021 | DR97_6043 | annotation not available | Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.608 |
DR97_6021 | toxR | DR97_6021 | DR97_1410 | annotation not available | Exotoxin a regulatory protein; Positive regulation of toxA gene transcription | 0.526 |
DR97_6022 | DR97_2136 | DR97_6022 | DR97_2136 | annotation not available | annotation not available | 0.531 |
DR97_6022 | DR97_6021 | DR97_6022 | DR97_6021 | annotation not available | annotation not available | 0.986 |
DR97_6022 | DR97_6039 | DR97_6022 | DR97_6039 | annotation not available | annotation not available | 0.599 |
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