Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1429 | DR97_1430 | DR97_1429 | DR97_1430 | annotation not available | annotation not available | 0.875 |
DR97_1429 | DR97_2576 | DR97_1429 | DR97_2576 | annotation not available | annotation not available | 0.863 |
DR97_1429 | PitA | DR97_1429 | DR97_1467 | annotation not available | annotation not available | 0.863 |
DR97_1429 | ctpL | DR97_1429 | DR97_2195 | annotation not available | Methyl-accepting chemotaxis (mcp) signaling domain protein; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. Chemoreceptor for inorganic phosphate, which is required for taxis at low concentrations of phosphate. Is also responsible for the positive chemotaxis toward 4-chloroaniline (4CA) and catechol . Does not recognize inorganic phosphate directly, but via a complex b [...] | 0.888 |
DR97_1429 | phoA | DR97_1429 | DR97_4634 | annotation not available | Alkaline phosphatase h; Has only phosphomonoesterase activity | 0.873 |
DR97_1429 | phoR | DR97_1429 | DR97_2732 | annotation not available | Two-component system, ompr family, phosphate regulon sensor histidine kinase phor; Member of the two-component regulatory system PhoR/PhoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoB in response to environmental signals | 0.869 |
DR97_1429 | phoU | DR97_1429 | DR97_2736 | annotation not available | Phosphate transport system regulatory protein phou; Plays a role in the regulation of phosphate uptake | 0.912 |
DR97_1429 | ppk1 | DR97_1429 | DR97_2611 | annotation not available | Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) | 0.872 |
DR97_1429 | pstA | DR97_1429 | DR97_2738 | annotation not available | 3a0107s02c: phosphate ABC transporter, permease protein PstA | 0.921 |
DR97_1429 | pstB | DR97_1429 | DR97_2737 | annotation not available | Phosphate transport system atp-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system | 0.896 |
DR97_1430 | DR97_1429 | DR97_1430 | DR97_1429 | annotation not available | annotation not available | 0.875 |
DR97_1430 | phoU | DR97_1430 | DR97_2736 | annotation not available | Phosphate transport system regulatory protein phou; Plays a role in the regulation of phosphate uptake | 0.423 |
DR97_1430 | pstA | DR97_1430 | DR97_2738 | annotation not available | 3a0107s02c: phosphate ABC transporter, permease protein PstA | 0.486 |
DR97_2576 | DR97_1429 | DR97_2576 | DR97_1429 | annotation not available | annotation not available | 0.863 |
DR97_2576 | phoA | DR97_2576 | DR97_4634 | annotation not available | Alkaline phosphatase h; Has only phosphomonoesterase activity | 0.480 |
DR97_2576 | phoR | DR97_2576 | DR97_2732 | annotation not available | Two-component system, ompr family, phosphate regulon sensor histidine kinase phor; Member of the two-component regulatory system PhoR/PhoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates PhoB in response to environmental signals | 0.576 |
DR97_2576 | phoU | DR97_2576 | DR97_2736 | annotation not available | Phosphate transport system regulatory protein phou; Plays a role in the regulation of phosphate uptake | 0.473 |
DR97_2576 | ppk1 | DR97_2576 | DR97_2611 | annotation not available | Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) | 0.525 |
DR97_2576 | pstA | DR97_2576 | DR97_2738 | annotation not available | 3a0107s02c: phosphate ABC transporter, permease protein PstA | 0.748 |
DR97_2576 | pstB | DR97_2576 | DR97_2737 | annotation not available | Phosphate transport system atp-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system | 0.506 |
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