DR97_1429 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_1429

annotation not available (199 aa)

Predicted Functional Partners:

pstA

0.918

phoU

0.910

pstB

0.893

DR97_1430

0.875

phoR

0.866

pstC

0.864

phoB

0.861

phoA

0.761

ppk1

0.751

DR97_1431

0.634

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1429	DR97_1430	DR97_1429	DR97_1430	annotation not available	annotation not available	0.875
DR97_1429	DR97_1431	DR97_1429	DR97_1431	annotation not available	annotation not available	0.634
DR97_1429	phoA	DR97_1429	DR97_4634	annotation not available	annotation not available	0.761
DR97_1429	phoB	DR97_1429	DR97_2731	annotation not available	phoB- phosphate regulon transcriptional regulatory protein PhoB	0.861
DR97_1429	phoR	DR97_1429	DR97_2732	annotation not available	PAS domain-containing sensor histidine kinase; phoR_proteo- phosphate regulon sensor kinase PhoR	0.866
DR97_1429	phoU	DR97_1429	DR97_2736	annotation not available	Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake	0.910
DR97_1429	ppk1	DR97_1429	DR97_2611	annotation not available	Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP); Belongs to the polyphosphate kinase 1 (PPK1) family	0.751
DR97_1429	pstA	DR97_1429	DR97_2738	annotation not available	3a0107s02c- phosphate ABC transporter, permease protein PstA	0.918
DR97_1429	pstB	DR97_1429	DR97_2737	annotation not available	Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family	0.893
DR97_1429	pstC	DR97_1429	DR97_2739	annotation not available	annotation not available	0.864
DR97_1430	DR97_1429	DR97_1430	DR97_1429	annotation not available	annotation not available	0.875
DR97_1430	DR97_1431	DR97_1430	DR97_1431	annotation not available	annotation not available	0.615
DR97_1430	phoU	DR97_1430	DR97_2736	annotation not available	Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake	0.413
DR97_1430	pstA	DR97_1430	DR97_2738	annotation not available	3a0107s02c- phosphate ABC transporter, permease protein PstA	0.465
DR97_1431	DR97_1429	DR97_1431	DR97_1429	annotation not available	annotation not available	0.634
DR97_1431	DR97_1430	DR97_1431	DR97_1430	annotation not available	annotation not available	0.615
DR97_1431	phoA	DR97_1431	DR97_4634	annotation not available	annotation not available	0.879
DR97_1431	phoB	DR97_1431	DR97_2731	annotation not available	phoB- phosphate regulon transcriptional regulatory protein PhoB	0.861
DR97_1431	phoR	DR97_1431	DR97_2732	annotation not available	PAS domain-containing sensor histidine kinase; phoR_proteo- phosphate regulon sensor kinase PhoR	0.866
DR97_1431	phoU	DR97_1431	DR97_2736	annotation not available	Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake	0.910

page 1 of 5

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2019

Credits

Access

Info

About