Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_146 | DR97_147 | DR97_146 | DR97_147 | annotation not available | annotation not available | 0.794 |
DR97_146 | DR97_148 | DR97_146 | DR97_148 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.596 |
DR97_147 | DR97_146 | DR97_147 | DR97_146 | annotation not available | annotation not available | 0.794 |
DR97_147 | DR97_148 | DR97_147 | DR97_148 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.590 |
DR97_147 | DR97_526 | DR97_147 | DR97_526 | annotation not available | annotation not available | 0.406 |
DR97_147 | EmrB | DR97_147 | DR97_2527 | annotation not available | Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily | 0.738 |
DR97_147 | PerM | DR97_147 | DR97_940 | annotation not available | Hypothetical protein; Transport of quorum-sensing signal protein | 0.678 |
DR97_147 | codA | DR97_147 | DR97_3405 | annotation not available | annotation not available | 0.483 |
DR97_147 | hisI | DR97_147 | DR97_2421 | annotation not available | Phosphoribosyl-amp cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP | 0.485 |
DR97_147 | nrdD | DR97_147 | DR97_5925 | annotation not available | Ribonucleoside-triphosphate reductase (formate); nrdD: anaerobic ribonucleoside-triphosphate reductase | 0.444 |
DR97_148 | DR97_146 | DR97_148 | DR97_146 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.596 |
DR97_148 | DR97_147 | DR97_148 | DR97_147 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.590 |
DR97_526 | DR97_147 | DR97_526 | DR97_147 | annotation not available | annotation not available | 0.406 |
EmrB | DR97_147 | DR97_2527 | DR97_147 | Drug resistance mfs transporter, drug:h+ antiporter-2 family protein; Belongs to the major facilitator superfamily | annotation not available | 0.738 |
PerM | DR97_147 | DR97_940 | DR97_147 | Hypothetical protein; Transport of quorum-sensing signal protein | annotation not available | 0.678 |
codA | DR97_147 | DR97_3405 | DR97_147 | annotation not available | annotation not available | 0.483 |
codA | hisI | DR97_3405 | DR97_2421 | annotation not available | Phosphoribosyl-amp cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP | 0.622 |
hisI | DR97_147 | DR97_2421 | DR97_147 | Phosphoribosyl-amp cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP | annotation not available | 0.485 |
hisI | codA | DR97_2421 | DR97_3405 | Phosphoribosyl-amp cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP | annotation not available | 0.622 |
hisI | nrdD | DR97_2421 | DR97_5925 | Phosphoribosyl-amp cyclohydrolase family protein; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP | Ribonucleoside-triphosphate reductase (formate); nrdD: anaerobic ribonucleoside-triphosphate reductase | 0.730 |
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