Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ColR | ColS | DR97_1558 | DR97_1557 | annotation not available | annotation not available | 0.999 |
ColR | DR97_1554 | DR97_1558 | DR97_1554 | annotation not available | Hypothetical protein; Putative secreted protein | 0.618 |
ColR | DR97_1556 | DR97_1558 | DR97_1556 | annotation not available | annotation not available | 0.722 |
ColR | WapQ | DR97_1558 | DR97_2362 | annotation not available | annotation not available | 0.722 |
ColR | inaA | DR97_1558 | DR97_1555 | annotation not available | annotation not available | 0.728 |
ColS | ColR | DR97_1557 | DR97_1558 | annotation not available | annotation not available | 0.999 |
ColS | DR97_1554 | DR97_1557 | DR97_1554 | annotation not available | Hypothetical protein; Putative secreted protein | 0.612 |
ColS | DR97_1556 | DR97_1557 | DR97_1556 | annotation not available | annotation not available | 0.884 |
ColS | DR97_2361 | DR97_1557 | DR97_2361 | annotation not available | annotation not available | 0.583 |
ColS | DR97_3283 | DR97_1557 | DR97_3283 | annotation not available | annotation not available | 0.466 |
ColS | WaaX | DR97_1557 | DR97_2363 | annotation not available | annotation not available | 0.668 |
ColS | WapQ | DR97_1557 | DR97_2362 | annotation not available | annotation not available | 0.775 |
ColS | inaA | DR97_1557 | DR97_1555 | annotation not available | annotation not available | 0.848 |
DR97_1554 | ColR | DR97_1554 | DR97_1558 | Hypothetical protein; Putative secreted protein | annotation not available | 0.618 |
DR97_1554 | ColS | DR97_1554 | DR97_1557 | Hypothetical protein; Putative secreted protein | annotation not available | 0.612 |
DR97_1554 | DR97_1556 | DR97_1554 | DR97_1556 | Hypothetical protein; Putative secreted protein | annotation not available | 0.875 |
DR97_1554 | inaA | DR97_1554 | DR97_1555 | Hypothetical protein; Putative secreted protein | annotation not available | 0.867 |
DR97_1556 | ColR | DR97_1556 | DR97_1558 | annotation not available | annotation not available | 0.722 |
DR97_1556 | ColS | DR97_1556 | DR97_1557 | annotation not available | annotation not available | 0.884 |
DR97_1556 | DR97_1554 | DR97_1556 | DR97_1554 | annotation not available | Hypothetical protein; Putative secreted protein | 0.875 |
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