STRINGSTRING
ubiE_3 protein (Pseudomonas aeruginosa) - STRING interaction network
"ubiE_3" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiE_3annotation not available (227 aa)    
Predicted Functional Partners:
inaA
annotation not available (234 aa)
   
  0.979
colS
annotation not available (426 aa)
 
      0.880
DR97_1554
Putative secreted protein (80 aa)
 
          0.875
wapP
annotation not available (244 aa)
 
 
      0.777
colR
annotation not available (227 aa)
 
 
      0.738
wapQ
annotation not available (252 aa)
 
      0.736
DR97_2361
annotation not available (492 aa)
 
 
      0.731
amrZ
annotation not available (108 aa)
    
          0.704
DR97_3283
annotation not available (310 aa)
    
     
  0.687
DR97_2353
annotation not available (216 aa)
 
 
      0.686
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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