Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1570 | ampG | DR97_1570 | DR97_1571 | annotation not available | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.793 |
DR97_3693 | ampG | DR97_3693 | DR97_1571 | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; Transporter; sider_RhtX_FptX: siderophore transporter, RhtX/FptX family protein | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.848 |
ampC | ampD | DR97_3761 | DR97_1701 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | annotation not available | 0.928 |
ampC | ampDh2 | DR97_3761 | DR97_2863 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | annotation not available | 0.873 |
ampC | ampG | DR97_3761 | DR97_1571 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.872 |
ampC | ampR | DR97_3761 | DR97_3762 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | Lysr family transcriptional regulator, regulator of gene expression of beta-lactamase; This protein is a positive regulator of gene expression of beta-lactamase (AmpC) | 0.953 |
ampC | dacB | DR97_3761 | DR97_4889 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | Serine-type d-ala-d-ala carboxypeptidase/endopeptidase (penicillin-binding protein 4); PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.928 |
ampC | nagZ | DR97_3761 | DR97_4932 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | Beta-n-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (By similarity). Contributes to intrinsic fosfomycin resistance in P.aeruginosa | 0.901 |
ampC | sltB1 | DR97_3761 | DR97_3866 | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | mltB: lytic murein transglycosylase B | 0.702 |
ampD | ampC | DR97_1701 | DR97_3761 | annotation not available | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | 0.928 |
ampD | ampDh2 | DR97_1701 | DR97_2863 | annotation not available | annotation not available | 0.430 |
ampD | ampG | DR97_1701 | DR97_1571 | annotation not available | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.907 |
ampD | ampR | DR97_1701 | DR97_3762 | annotation not available | Lysr family transcriptional regulator, regulator of gene expression of beta-lactamase; This protein is a positive regulator of gene expression of beta-lactamase (AmpC) | 0.913 |
ampD | anmK | DR97_1701 | DR97_3619 | annotation not available | Anhydro-n-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P (By similarity). Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. Contributes to intrinsic fosfomycin resistance in P.aeruginosa | 0.879 |
ampD | dacB | DR97_1701 | DR97_4889 | annotation not available | Serine-type d-ala-d-ala carboxypeptidase/endopeptidase (penicillin-binding protein 4); PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | 0.924 |
ampD | nagZ | DR97_1701 | DR97_4932 | annotation not available | Beta-n-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides (By similarity). Contributes to intrinsic fosfomycin resistance in P.aeruginosa | 0.959 |
ampD | sltB1 | DR97_1701 | DR97_3866 | annotation not available | mltB: lytic murein transglycosylase B | 0.713 |
ampDh2 | ampC | DR97_2863 | DR97_3761 | annotation not available | Beta-lactamase class c pdc; Belongs to the class-C beta-lactamase family | 0.873 |
ampDh2 | ampD | DR97_2863 | DR97_1701 | annotation not available | annotation not available | 0.430 |
ampDh2 | ampG | DR97_2863 | DR97_1571 | annotation not available | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.872 |
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