STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglXPeriplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family (764 aa)    
Predicted Functional Partners:
yscU
annotation not available
   
  
 0.831
pscL
Yop proteins translocation protein L; hrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family
   
  
 0.815
treZ
trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase
     
 0.694
nagE
N-acetylglucosamine pts system eiicba or eiicb component; PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component
     
 0.603
rbsR
annotation not available
 
 
 0.588
ccpA
Cytochrome c551 peroxidase precursor; Catalyzes the peroxidative oxidation of azurin and cytochrome c551. Likely to provide protection against toxic peroxides
     
 0.575
DR97_160
Membrane sensor domain-containing protein; Putative signaling protein PA1727; GGDEF: diguanylate cyclase domain protein
     
 0.527
DR97_5247
annotation not available
   
    0.522
cbpD
Chitin binding domain protein; Binds chitin but does not hydrolyze it, has no detectable protease or staphylolytic activity
      
 0.520
pscK
annotation not available
   
    0.518
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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