DR97_1723 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DR97_1723

annotation not available (288 aa)

Predicted Functional Partners:

DR97_1728

0.937

DR97_1741

0.873

dnaB3

0.873

DR97_1726

0.864

DR97_1729

0.850

DR97_1730

0.845

DR97_1727

0.845

DR97_1725

0.845

DR97_1724

0.845

DR97_1742

0.837

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1723	DR97_1724	DR97_1723	DR97_1724	annotation not available	Uncharacterized protein	0.845
DR97_1723	DR97_1725	DR97_1723	DR97_1725	annotation not available	Uncharacterized protein	0.845
DR97_1723	DR97_1726	DR97_1723	DR97_1726	annotation not available	Uncharacterized protein	0.864
DR97_1723	DR97_1727	DR97_1723	DR97_1727	annotation not available	annotation not available	0.845
DR97_1723	DR97_1728	DR97_1723	DR97_1728	annotation not available	Uncharacterized protein	0.937
DR97_1723	DR97_1729	DR97_1723	DR97_1729	annotation not available	annotation not available	0.850
DR97_1723	DR97_1730	DR97_1723	DR97_1730	annotation not available	Uncharacterized protein	0.845
DR97_1723	DR97_1741	DR97_1723	DR97_1741	annotation not available	annotation not available	0.873
DR97_1723	DR97_1742	DR97_1723	DR97_1742	annotation not available	Uncharacterized protein	0.837
DR97_1723	dnaB3	DR97_1723	DR97_1731	annotation not available	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	0.873
DR97_1724	DR97_1723	DR97_1724	DR97_1723	Uncharacterized protein	annotation not available	0.845
DR97_1724	DR97_1725	DR97_1724	DR97_1725	Uncharacterized protein	Uncharacterized protein	0.845
DR97_1724	DR97_1726	DR97_1724	DR97_1726	Uncharacterized protein	Uncharacterized protein	0.845
DR97_1724	DR97_1727	DR97_1724	DR97_1727	Uncharacterized protein	annotation not available	0.845
DR97_1724	DR97_1728	DR97_1724	DR97_1728	Uncharacterized protein	Uncharacterized protein	0.845
DR97_1724	DR97_1729	DR97_1724	DR97_1729	Uncharacterized protein	annotation not available	0.845
DR97_1724	DR97_1730	DR97_1724	DR97_1730	Uncharacterized protein	Uncharacterized protein	0.845
DR97_1724	dnaB3	DR97_1724	DR97_1731	Uncharacterized protein	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	0.845
DR97_1725	DR97_1723	DR97_1725	DR97_1723	Uncharacterized protein	annotation not available	0.845
DR97_1725	DR97_1724	DR97_1725	DR97_1724	Uncharacterized protein	Uncharacterized protein	0.845

page 1 of 5

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2020

Credits

Access

Info

About