STRINGSTRING
tniB protein (Pseudomonas aeruginosa) - STRING interaction network
"tniB" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tniBannotation not available (302 aa)    
Predicted Functional Partners:
DR97_1811
annotation not available (559 aa)
     
  0.979
DR97_1809
annotation not available (405 aa)
 
     
  0.977
DR97_1808
Resolvase, N terminal domain protein (204 aa)
 
   
  0.906
tnpA
Transposase for transposon Tn501; Required for transposition of transposon Tn501 (988 aa)
   
     
  0.851
tnpR
Transposon Tn501 resolvase; Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products (186 aa)
   
   
  0.791
merD
merD- mercuric resistence transcriptional repressor protein MerD (121 aa)
 
     
  0.749
merA
merA- mercuric reductase (548 aa)
   
     
  0.747
merE
annotation not available (78 aa)
   
          0.745
merT
Mercuric transport protein MerT; Involved in mercury resistance. Probably transfers a mercuric ion from the periplasmic Hg(2+)-binding protein MerP to the cytoplasmic mercuric reductase MerA (Probable); Belongs to the MerT family (116 aa)
   
     
  0.717
metN_3
annotation not available (264 aa)
           
  0.711
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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