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rpsT protein (Pseudomonas aeruginosa) - STRING interaction network
"rpsT" - 30S ribosomal protein S20 in Pseudomonas aeruginosa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (91 aa)    
Predicted Functional Partners:
rpsU
S21p- ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family (71 aa)
   
 
  0.995
rpmH
rpmH_bact- ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family (44 aa)
   
 
  0.991
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (103 aa)
   
 
  0.990
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
     
 
  0.990
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (148 aa)
 
 
  0.989
rpsI
annotation not available (130 aa)
     
 
  0.989
rplW
50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (99 aa)
 
 
  0.988
rpsB
rpsB_bact- ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family (246 aa)
   
 
  0.987
rpsP
S16- ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family (83 aa)
   
 
  0.987
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
   
 
  0.985
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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