Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3191 | DR97_3943 | DR97_3191 | DR97_3943 | Hypothetical protein; Nucleoside-binding protein | Hypothetical protein; Uncharacterized protein | 0.636 |
DR97_3191 | IutA | DR97_3191 | DR97_2011 | Hypothetical protein; Nucleoside-binding protein | tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.670 |
DR97_3191 | lptD | DR97_3191 | DR97_3564 | Hypothetical protein; Nucleoside-binding protein | Organic solvent tolerance family protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.638 |
DR97_3191 | opdC | DR97_3191 | DR97_3118 | Hypothetical protein; Nucleoside-binding protein | annotation not available | 0.636 |
DR97_3191 | opdK | DR97_3191 | DR97_2249 | Hypothetical protein; Nucleoside-binding protein | annotation not available | 0.636 |
DR97_3191 | oprH | DR97_3191 | DR97_756 | Hypothetical protein; Nucleoside-binding protein | PhoP/Q and low Mg2+ inducible outer membrane protein H1; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.732 |
DR97_3943 | DR97_3191 | DR97_3943 | DR97_3191 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Nucleoside-binding protein | 0.636 |
DR97_3943 | IutA | DR97_3943 | DR97_2011 | Hypothetical protein; Uncharacterized protein | tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.630 |
DR97_3943 | lptD | DR97_3943 | DR97_3564 | Hypothetical protein; Uncharacterized protein | Organic solvent tolerance family protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane | 0.587 |
DR97_3943 | oprH | DR97_3943 | DR97_756 | Hypothetical protein; Uncharacterized protein | PhoP/Q and low Mg2+ inducible outer membrane protein H1; OMP85_target: outer membrane insertion C-terminal signal domain protein | 0.719 |
FecA | FecR | DR97_4663 | DR97_3966 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.943 |
FecA | IutA | DR97_4663 | DR97_2011 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.732 |
FecA | tonB | DR97_4663 | DR97_2910 | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.728 |
FecR | FecA | DR97_3966 | DR97_4663 | annotation not available | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.943 |
FecR | IutA | DR97_3966 | DR97_2011 | annotation not available | tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.778 |
FecR | fecA | DR97_3966 | DR97_3965 | annotation not available | annotation not available | 0.981 |
IutA | DR97_3191 | DR97_2011 | DR97_3191 | tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Nucleoside-binding protein | 0.670 |
IutA | DR97_3943 | DR97_2011 | DR97_3943 | tonB-siderophor: TonB-dependent siderophore receptor family protein | Hypothetical protein; Uncharacterized protein | 0.630 |
IutA | FecA | DR97_2011 | DR97_4663 | tonB-siderophor: TonB-dependent siderophore receptor family protein | Fe(3+) dicitrate transport protein FecA; tonB-siderophor: TonB-dependent siderophore receptor family protein | 0.732 |
IutA | FecR | DR97_2011 | DR97_3966 | tonB-siderophor: TonB-dependent siderophore receptor family protein | annotation not available | 0.778 |
page 1 of 3