Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2058 | DR97_2059 | DR97_2058 | DR97_2059 | Uncharacterized protein; phzF_: phenazine biosynthesis , PhzF family protein | annotation not available | 0.726 |
DR97_2058 | YfdZ | DR97_2058 | DR97_2057 | Uncharacterized protein; phzF_: phenazine biosynthesis , PhzF family protein | annotation not available | 0.615 |
DR97_2059 | DR97_2058 | DR97_2059 | DR97_2058 | annotation not available | Uncharacterized protein; phzF_: phenazine biosynthesis , PhzF family protein | 0.726 |
DR97_2059 | YedI | DR97_2059 | DR97_20 | annotation not available | Uncharacterized protein; Inner membrane protein YedI | 0.464 |
DR97_2059 | YfdZ | DR97_2059 | DR97_2057 | annotation not available | annotation not available | 0.456 |
DR97_2059 | YjgR | DR97_2059 | DR97_1483 | annotation not available | annotation not available | 0.642 |
DR97_2059 | gspL | DR97_2059 | DR97_4837 | annotation not available | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins | 0.483 |
DR97_2059 | purL | DR97_2059 | DR97_4112 | annotation not available | Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate | 0.515 |
DR97_2059 | tolB | DR97_2059 | DR97_965 | annotation not available | Tol-pal system beta propeller repeat protein tolb; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | 0.847 |
YedI | DR97_2059 | DR97_20 | DR97_2059 | Uncharacterized protein; Inner membrane protein YedI | annotation not available | 0.464 |
YfdZ | DR97_2058 | DR97_2057 | DR97_2058 | annotation not available | Uncharacterized protein; phzF_: phenazine biosynthesis , PhzF family protein | 0.615 |
YfdZ | DR97_2059 | DR97_2057 | DR97_2059 | annotation not available | annotation not available | 0.456 |
YjgR | DR97_2059 | DR97_1483 | DR97_2059 | annotation not available | annotation not available | 0.642 |
gspL | DR97_2059 | DR97_4837 | DR97_2059 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins | annotation not available | 0.483 |
purL | DR97_2059 | DR97_4112 | DR97_2059 | Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate | annotation not available | 0.515 |
tolB | DR97_2059 | DR97_965 | DR97_2059 | Tol-pal system beta propeller repeat protein tolb; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity | annotation not available | 0.847 |