Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BenK | DR97_2253 | DR97_2251 | DR97_2253 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.472 |
BenK | PchA | DR97_2251 | DR97_2250 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.814 |
BenK | mdlC | DR97_2251 | DR97_2252 | annotation not available | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.816 |
DR97_2253 | BenK | DR97_2253 | DR97_2251 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.472 |
DR97_2253 | PchA | DR97_2253 | DR97_2250 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.439 |
DR97_2253 | mdlC | DR97_2253 | DR97_2252 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.739 |
DR97_2765 | DR97_4899 | DR97_2765 | DR97_4899 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | annotation not available | 0.682 |
DR97_2765 | mdlC | DR97_2765 | DR97_2252 | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.744 |
DR97_4899 | DR97_2765 | DR97_4899 | DR97_2765 | annotation not available | acOrn-deacetyl: acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily | 0.682 |
DR97_4899 | mdlC | DR97_4899 | DR97_2252 | annotation not available | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.866 |
PchA | BenK | DR97_2250 | DR97_2251 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.814 |
PchA | DR97_2253 | DR97_2250 | DR97_2253 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.439 |
PchA | gltB | DR97_2250 | DR97_2391 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.845 |
PchA | mdlC | DR97_2250 | DR97_2252 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.726 |
atuE | mdlC | DR97_5051 | DR97_2252 | annotation not available | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.894 |
gltB | PchA | DR97_2391 | DR97_2250 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.845 |
gltB | ilvN | DR97_2391 | DR97_2037 | annotation not available | Acetolactate synthase 3 regulatory subunit; Acolac_sm: acetolactate synthase, small subunit | 0.891 |
gltB | mdlC | DR97_2391 | DR97_2252 | annotation not available | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.713 |
ilvN | gltB | DR97_2037 | DR97_2391 | Acetolactate synthase 3 regulatory subunit; Acolac_sm: acetolactate synthase, small subunit | annotation not available | 0.891 |
ilvN | mdlC | DR97_2037 | DR97_2252 | Acetolactate synthase 3 regulatory subunit; Acolac_sm: acetolactate synthase, small subunit | Benzoylformate decarboxylase; Belongs to the TPP enzyme family | 0.881 |
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