Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1328 | DR97_5612 | DR97_1328 | DR97_5612 | annotation not available | annotation not available | 0.454 |
DR97_1328 | MgtC | DR97_1328 | DR97_1942 | annotation not available | annotation not available | 0.567 |
DR97_1328 | hflC | DR97_1328 | DR97_2294 | annotation not available | Modulator of ftsh protease hflc; HflC and HflK could regulate a protease | 0.964 |
DR97_1328 | hflK | DR97_1328 | DR97_2295 | annotation not available | Modulator of ftsh protease hflk; HflC and HflK could encode or regulate a protease | 0.953 |
DR97_1328 | nnrD | DR97_1328 | DR97_2302 | annotation not available | Adp-dependent nad(p)h-hydrate dehydratase / nad(p)h-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.433 |
DR97_2293 | hflC | DR97_2293 | DR97_2294 | Uncharacterized protein; Putative membrane protein | Modulator of ftsh protease hflc; HflC and HflK could regulate a protease | 0.792 |
DR97_2293 | hflK | DR97_2293 | DR97_2295 | Uncharacterized protein; Putative membrane protein | Modulator of ftsh protease hflk; HflC and HflK could encode or regulate a protease | 0.792 |
DR97_2293 | hflX | DR97_2293 | DR97_2296 | Uncharacterized protein; Putative membrane protein | Putative gtp-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis | 0.679 |
DR97_2293 | hfq | DR97_2293 | DR97_2297 | Uncharacterized protein; Putative membrane protein | Host factor-i protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs | 0.612 |
DR97_2293 | miaA | DR97_2293 | DR97_2298 | Uncharacterized protein; Putative membrane protein | Trna delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | 0.507 |
DR97_2293 | nnrD | DR97_2293 | DR97_2302 | Uncharacterized protein; Putative membrane protein | Adp-dependent nad(p)h-hydrate dehydratase / nad(p)h-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.832 |
DR97_5612 | DR97_1328 | DR97_5612 | DR97_1328 | annotation not available | annotation not available | 0.454 |
DR97_5612 | ftsH | DR97_5612 | DR97_2095 | annotation not available | Atp-dependent metallopeptidase hflb family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins | 0.852 |
DR97_5612 | hflC | DR97_5612 | DR97_2294 | annotation not available | Modulator of ftsh protease hflc; HflC and HflK could regulate a protease | 0.813 |
DR97_5612 | hflK | DR97_5612 | DR97_2295 | annotation not available | Modulator of ftsh protease hflk; HflC and HflK could encode or regulate a protease | 0.813 |
MgtC | DR97_1328 | DR97_1942 | DR97_1328 | annotation not available | annotation not available | 0.567 |
MgtC | ftsH | DR97_1942 | DR97_2095 | annotation not available | Atp-dependent metallopeptidase hflb family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins | 0.883 |
MgtC | hflC | DR97_1942 | DR97_2294 | annotation not available | Modulator of ftsh protease hflc; HflC and HflK could regulate a protease | 0.813 |
MgtC | hflK | DR97_1942 | DR97_2295 | annotation not available | Modulator of ftsh protease hflk; HflC and HflK could encode or regulate a protease | 0.813 |
ftsH | DR97_5612 | DR97_2095 | DR97_5612 | Atp-dependent metallopeptidase hflb family protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins | annotation not available | 0.852 |
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