Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2275 | DR97_3867 | DR97_2275 | DR97_3867 | annotation not available | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.864 |
DR97_2275 | DR97_3874 | DR97_2275 | DR97_3874 | annotation not available | mltB_2: lytic murein transglycosylase family protein | 0.601 |
DR97_2275 | amiA | DR97_2275 | DR97_2916 | annotation not available | annotation not available | 0.583 |
DR97_2275 | amiB | DR97_2275 | DR97_2300 | annotation not available | annotation not available | 0.749 |
DR97_2275 | miaA | DR97_2275 | DR97_2298 | annotation not available | Trna delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | 0.511 |
DR97_2275 | mltG | DR97_2275 | DR97_4976 | annotation not available | Yceg-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation | 0.544 |
DR97_2275 | nnrD | DR97_2275 | DR97_2302 | annotation not available | Adp-dependent nad(p)h-hydrate dehydratase / nad(p)h-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.676 |
DR97_2275 | safA | DR97_2275 | DR97_67 | annotation not available | Membrane-bound lytic murein transglycosylase D; spore_safA: spore coat assembly SafA domain protein | 0.701 |
DR97_2301 | amiB | DR97_2301 | DR97_2300 | Uncharacterized protein; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | annotation not available | 0.897 |
DR97_2301 | miaA | DR97_2301 | DR97_2298 | Uncharacterized protein; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | Trna delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) | 0.867 |
DR97_2301 | mutL | DR97_2301 | DR97_2299 | Uncharacterized protein; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.970 |
DR97_2301 | nnrD | DR97_2301 | DR97_2302 | Uncharacterized protein; T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE | Adp-dependent nad(p)h-hydrate dehydratase / nad(p)h-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.984 |
DR97_3867 | DR97_2275 | DR97_3867 | DR97_2275 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | annotation not available | 0.864 |
DR97_3867 | DR97_3874 | DR97_3867 | DR97_3874 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | mltB_2: lytic murein transglycosylase family protein | 0.787 |
DR97_3867 | amiA | DR97_3867 | DR97_2916 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | annotation not available | 0.475 |
DR97_3867 | amiB | DR97_3867 | DR97_2300 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | annotation not available | 0.878 |
DR97_3867 | mltG | DR97_3867 | DR97_4976 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Yceg-like family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation | 0.947 |
DR97_3867 | mutL | DR97_3867 | DR97_2299 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Dna mismatch repair mutl family protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex | 0.566 |
DR97_3867 | safA | DR97_3867 | DR97_67 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Membrane-bound lytic murein transglycosylase D; spore_safA: spore coat assembly SafA domain protein | 0.979 |
DR97_3874 | DR97_2275 | DR97_3874 | DR97_2275 | mltB_2: lytic murein transglycosylase family protein | annotation not available | 0.601 |
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