Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2321 | DR97_2323 | DR97_2321 | DR97_2323 | annotation not available | Uncharacterized protein; Putative dehydrogenase | 0.631 |
DR97_2321 | aspP | DR97_2321 | DR97_2324 | annotation not available | annotation not available | 0.781 |
DR97_2321 | cpdA | DR97_2321 | DR97_2322 | annotation not available | Calcineurin-like phosphoesterase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes | 0.915 |
DR97_2323 | DR97_2321 | DR97_2323 | DR97_2321 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.631 |
DR97_2323 | DR97_4730 | DR97_2323 | DR97_4730 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.592 |
DR97_2323 | DR97_6061 | DR97_2323 | DR97_6061 | Uncharacterized protein; Putative dehydrogenase | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.571 |
DR97_2323 | algQ | DR97_2323 | DR97_2626 | Uncharacterized protein; Putative dehydrogenase | Regulator of rna polymerase sigma(70) subunit, rsd/algq family protein; The promoter for a critical alginate biosynthetic gene, AlgD, encoding GDP-mannose dehydrogenase, is activated only under conditions reminiscent of the cystic fibrosis lung (i.e. under high osmolarity), and at least two regulatory genes, AlgP and AlgQ, have been implicated in this activation process | 0.722 |
DR97_2323 | aspP | DR97_2323 | DR97_2324 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.970 |
DR97_2323 | cpdA | DR97_2323 | DR97_2322 | Uncharacterized protein; Putative dehydrogenase | Calcineurin-like phosphoesterase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes | 0.825 |
DR97_2323 | dnaK | DR97_2323 | DR97_2105 | Uncharacterized protein; Putative dehydrogenase | Molecular chaperone dnak; Acts as a chaperone | 0.527 |
DR97_2323 | mucA | DR97_2323 | DR97_1220 | Uncharacterized protein; Putative dehydrogenase | Sigma-e factor negative regulatory protein rsea; Negative regulator of the sigma factor AlgU. Plays a role in the differentiation of P.aeruginosa into the alginate-producing form. Inactivation of mucA causes a switch from the non-mucoid to mucoid state resulting in constitutive expression of alginate biosynthetic genes | 0.558 |
DR97_2323 | pilN | DR97_2323 | DR97_2398 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.822 |
DR97_2323 | pppA | DR97_2323 | DR97_3032 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.576 |
DR97_4730 | DR97_2323 | DR97_4730 | DR97_2323 | annotation not available | Uncharacterized protein; Putative dehydrogenase | 0.592 |
DR97_4730 | mucA | DR97_4730 | DR97_1220 | annotation not available | Sigma-e factor negative regulatory protein rsea; Negative regulator of the sigma factor AlgU. Plays a role in the differentiation of P.aeruginosa into the alginate-producing form. Inactivation of mucA causes a switch from the non-mucoid to mucoid state resulting in constitutive expression of alginate biosynthetic genes | 0.860 |
DR97_4730 | pppA | DR97_4730 | DR97_3032 | annotation not available | annotation not available | 0.570 |
DR97_6061 | DR97_2323 | DR97_6061 | DR97_2323 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Uncharacterized protein; Putative dehydrogenase | 0.571 |
DR97_6061 | dnaK | DR97_6061 | DR97_2105 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | Molecular chaperone dnak; Acts as a chaperone | 0.630 |
DR97_6061 | pppA | DR97_6061 | DR97_3032 | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | annotation not available | 0.887 |
algQ | DR97_2323 | DR97_2626 | DR97_2323 | Regulator of rna polymerase sigma(70) subunit, rsd/algq family protein; The promoter for a critical alginate biosynthetic gene, AlgD, encoding GDP-mannose dehydrogenase, is activated only under conditions reminiscent of the cystic fibrosis lung (i.e. under high osmolarity), and at least two regulatory genes, AlgP and AlgQ, have been implicated in this activation process | Uncharacterized protein; Putative dehydrogenase | 0.722 |
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