STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_240annotation not available (334 aa)    
Predicted Functional Partners:
YwnB
annotation not available
      
 0.866
wrbA
Belongs to the WrbA family
   
    0.625
DR97_239
annotation not available
 
 
 0.601
DR97_3799
annotation not available
   
  
 0.519
DR97_242
Putative sulfate transporterc/MT1781; putative sulfate transporter Rv1739c/MT1781
       0.517
DR97_50
annotation not available
 
   0.500
DR97_5620
Acyl-CoA dehydrogenase family member 10; acyl-CoA dehydrogenase, N-terminal domain protein
 
   0.468
YhfP
oxido_YhdH: quinone oxidoreductase, YhdH/YhfP family protein
 
 
 0.465
DR97_6208
annotation not available
 
   0.458
Qor
Quinone_pig3: NAD(P)H quinone oxidoreductase, PIG3 family protein
 
 
 0.429
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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