Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1325 | PhaI | DR97_1325 | DR97_2416 | annotation not available | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.682 |
DR97_1325 | phaC1 | DR97_1325 | DR97_2411 | annotation not available | PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II family protein | 0.483 |
DR97_2417 | PhaI | DR97_2417 | DR97_2416 | annotation not available | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.862 |
DR97_2417 | phaF | DR97_2417 | DR97_2415 | annotation not available | Polyhydroxyalkanoate synthesis protein PhaF; PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.828 |
DR97_5301 | PhaD | DR97_5301 | DR97_2414 | annotation not available | annotation not available | 0.402 |
DR97_5301 | PhaI | DR97_5301 | DR97_2416 | annotation not available | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.607 |
DR97_5301 | phaF | DR97_5301 | DR97_2415 | annotation not available | Polyhydroxyalkanoate synthesis protein PhaF; PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.584 |
PhaD | DR97_5301 | DR97_2414 | DR97_5301 | annotation not available | annotation not available | 0.402 |
PhaD | PhaI | DR97_2414 | DR97_2416 | annotation not available | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.683 |
PhaD | phaC1 | DR97_2414 | DR97_2411 | annotation not available | PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II family protein | 0.523 |
PhaD | phaC2 | DR97_2414 | DR97_2413 | annotation not available | Poly(3-hydroxyalkanoate) polymerase 2; PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II family protein | 0.847 |
PhaD | phaF | DR97_2414 | DR97_2415 | annotation not available | Polyhydroxyalkanoate synthesis protein PhaF; PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | 0.695 |
PhaD | phaZ | DR97_2414 | DR97_2412 | annotation not available | Poly(3-hydroxyalkanoic acid) depolymerase; PHA_depoly_arom: poly(3-hydroxyalkanoate) depolymerase | 0.743 |
PhaI | DR97_1325 | DR97_2416 | DR97_1325 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.682 |
PhaI | DR97_2417 | DR97_2416 | DR97_2417 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.862 |
PhaI | DR97_5301 | DR97_2416 | DR97_5301 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.607 |
PhaI | PhaD | DR97_2416 | DR97_2414 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.683 |
PhaI | PhaJ1 | DR97_2416 | DR97_4628 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.682 |
PhaI | UreJ | DR97_2416 | DR97_2245 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | annotation not available | 0.573 |
PhaI | phaC1 | DR97_2416 | DR97_2411 | PHA_granule_1: poly(hydroxyalkanoate) granule-associated domain protein | PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II family protein | 0.885 |
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