STRINGSTRING
cynR_2 protein (Pseudomonas aeruginosa) - STRING interaction network
"cynR_2" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynR_2annotation not available (302 aa)    
Predicted Functional Partners:
dadA2
D-amino acid dehydrogenase; Oxidative deamination of D-amino acids (416 aa)
 
        0.718
dmlR_2
annotation not available (304 aa)
   
          0.643
DR97_1199
annotation not available (305 aa)
   
          0.575
DR97_2438
annotation not available (116 aa)
   
        0.568
gltC_1
annotation not available (298 aa)
   
          0.560
gltI1
annotation not available (299 aa)
 
          0.557
DR97_2587
annotation not available (304 aa)
   
   
  0.537
DR97_5738
annotation not available (317 aa)
   
          0.512
DR97_2265
annotation not available (312 aa)
   
          0.511
DR97_365
Uncharacterized protein; phn_lysR- aminoethylphosphonate catabolism associated LysR transcriptional regulator family protein (293 aa)
   
   
  0.510
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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