Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CodB | DR97_2455 | DR97_2453 | DR97_2455 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | annotation not available | 0.411 |
CodB | DR97_2458 | DR97_2453 | DR97_2458 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Uncharacterized protein; Conserved hypothetical protein | 0.456 |
CodB | DR97_480 | DR97_2453 | DR97_480 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Hypothetical protein; Uncharacterized protein | 0.447 |
CodB | hutC | DR97_2453 | DR97_2459 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Gntr family transcriptional regulator, histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer (By similarity) | 0.440 |
CodB | hutU | DR97_2453 | DR97_2454 | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate | 0.830 |
DR97_2455 | CodB | DR97_2455 | DR97_2453 | annotation not available | Permease for cytosine/purine, uracil, thiamine, allantoin family protein; Belongs to the purine-cytosine permease (2.A.39) family | 0.411 |
DR97_2455 | DR97_2456 | DR97_2455 | DR97_2456 | annotation not available | annotation not available | 0.968 |
DR97_2455 | DR97_2457 | DR97_2455 | DR97_2457 | annotation not available | annotation not available | 0.795 |
DR97_2455 | DR97_2458 | DR97_2455 | DR97_2458 | annotation not available | Uncharacterized protein; Conserved hypothetical protein | 0.481 |
DR97_2455 | DR97_480 | DR97_2455 | DR97_480 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.497 |
DR97_2455 | KguE | DR97_2455 | DR97_6173 | annotation not available | annotation not available | 0.442 |
DR97_2455 | hutC | DR97_2455 | DR97_2459 | annotation not available | Gntr family transcriptional regulator, histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer (By similarity) | 0.545 |
DR97_2455 | hutU | DR97_2455 | DR97_2454 | annotation not available | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate | 0.407 |
DR97_2456 | DR97_2455 | DR97_2456 | DR97_2455 | annotation not available | annotation not available | 0.968 |
DR97_2456 | DR97_2457 | DR97_2456 | DR97_2457 | annotation not available | annotation not available | 0.816 |
DR97_2456 | DR97_2458 | DR97_2456 | DR97_2458 | annotation not available | Uncharacterized protein; Conserved hypothetical protein | 0.504 |
DR97_2456 | DR97_480 | DR97_2456 | DR97_480 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.592 |
DR97_2456 | hutC | DR97_2456 | DR97_2459 | annotation not available | Gntr family transcriptional regulator, histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer (By similarity) | 0.504 |
DR97_2457 | DR97_2455 | DR97_2457 | DR97_2455 | annotation not available | annotation not available | 0.795 |
DR97_2457 | DR97_2456 | DR97_2457 | DR97_2456 | annotation not available | annotation not available | 0.816 |
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