attL protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

attL

annotation not available (387 aa)

Predicted Functional Partners:

DR97_2553

0.901

inrR

0.853

ehhadh

0.804

DR97_2556

0.797

DR97_5186

0.759

PACL_0512

0.753

DR97_5073

0.717

DR97_2558

0.643

dusA

0.576

adhA

0.554

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_2553	DR97_2556	DR97_2553	DR97_2556	annotation not available	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	0.717
DR97_2553	DR97_2558	DR97_2553	DR97_2558	annotation not available	annotation not available	0.499
DR97_2553	attL	DR97_2553	DR97_2555	annotation not available	annotation not available	0.901
DR97_2553	ehhadh	DR97_2553	DR97_2557	annotation not available	annotation not available	0.760
DR97_2556	DR97_2553	DR97_2556	DR97_2553	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.717
DR97_2556	DR97_2558	DR97_2556	DR97_2558	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.584
DR97_2556	attL	DR97_2556	DR97_2555	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.797
DR97_2556	ehhadh	DR97_2556	DR97_2557	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	annotation not available	0.964
DR97_2558	DR97_2553	DR97_2558	DR97_2553	annotation not available	annotation not available	0.499
DR97_2558	DR97_2556	DR97_2558	DR97_2556	annotation not available	Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein	0.584
DR97_2558	attL	DR97_2558	DR97_2555	annotation not available	annotation not available	0.643
DR97_2558	ehhadh	DR97_2558	DR97_2557	annotation not available	annotation not available	0.574
DR97_5073	PACL_0512	DR97_5073	DR97_1994	Terminase	annotation not available	0.410
DR97_5073	attL	DR97_5073	DR97_2555	Terminase	annotation not available	0.717
DR97_5186	attL	DR97_5186	DR97_2555	Uncharacterized protein; Dyp_perox_fam: Dyp-type peroxidase family protein	annotation not available	0.759
PACL_0512	DR97_5073	DR97_1994	DR97_5073	annotation not available	Terminase	0.410
PACL_0512	attL	DR97_1994	DR97_2555	annotation not available	annotation not available	0.753
PACL_0512	dusA	DR97_1994	DR97_5148	annotation not available	tRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily	0.406
adhA	attL	DR97_2804	DR97_2555	annotation not available	annotation not available	0.554
attL	DR97_2553	DR97_2555	DR97_2553	annotation not available	annotation not available	0.901

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