Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AttL | DR97_1840 | DR97_2555 | DR97_1840 | annotation not available | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | 0.672 |
AttL | DR97_2553 | DR97_2555 | DR97_2553 | annotation not available | annotation not available | 0.922 |
AttL | DR97_2556 | DR97_2555 | DR97_2556 | annotation not available | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | 0.807 |
AttL | DR97_2557 | DR97_2555 | DR97_2557 | annotation not available | annotation not available | 0.812 |
AttL | DR97_2558 | DR97_2555 | DR97_2558 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.683 |
AttL | DR97_3075 | DR97_2555 | DR97_3075 | annotation not available | annotation not available | 0.728 |
AttL | DR97_5073 | DR97_2555 | DR97_5073 | annotation not available | Hypothetical protein; Terminase | 0.731 |
AttL | DR97_5574 | DR97_2555 | DR97_5574 | annotation not available | Hypothetical protein; Uncharacterized protein ORF C103 | 0.683 |
AttL | DR97_5676 | DR97_2555 | DR97_5676 | annotation not available | annotation not available | 0.683 |
AttL | ttcA | DR97_2555 | DR97_742 | annotation not available | Trna 2-thiocytidine biosynthesis protein ttca; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system | 0.838 |
DR97_1840 | AttL | DR97_1840 | DR97_2555 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | annotation not available | 0.672 |
DR97_1840 | DR97_5574 | DR97_1840 | DR97_5574 | Relaxase; ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class | Hypothetical protein; Uncharacterized protein ORF C103 | 0.898 |
DR97_2553 | AttL | DR97_2553 | DR97_2555 | annotation not available | annotation not available | 0.922 |
DR97_2553 | DR97_2556 | DR97_2553 | DR97_2556 | annotation not available | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | 0.733 |
DR97_2553 | DR97_2557 | DR97_2553 | DR97_2557 | annotation not available | annotation not available | 0.780 |
DR97_2553 | DR97_2558 | DR97_2553 | DR97_2558 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.557 |
DR97_2556 | AttL | DR97_2556 | DR97_2555 | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | annotation not available | 0.807 |
DR97_2556 | DR97_2553 | DR97_2556 | DR97_2553 | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | annotation not available | 0.733 |
DR97_2556 | DR97_2557 | DR97_2556 | DR97_2557 | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | annotation not available | 0.968 |
DR97_2556 | DR97_2558 | DR97_2556 | DR97_2558 | Putative acyl-coa dehydrogenase; Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.596 |
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