STRINGSTRING
attL protein (Pseudomonas aeruginosa) - STRING interaction network
"attL" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
attLannotation not available (387 aa)    
Predicted Functional Partners:
DR97_2553
annotation not available (147 aa)
 
        0.901
inrR
Uncharacterized protein ORF C103 (175 aa)
            
  0.853
ehhadh
annotation not available (411 aa)
   
   
  0.804
DR97_2556
Uncharacterized protein; acyl-CoA dehydrogenase, N-terminal domain protein (596 aa)
   
   
  0.797
DR97_5186
Uncharacterized protein; Dyp_perox_fam- Dyp-type peroxidase family protein (293 aa)
            
  0.759
PACL_0512
annotation not available (333 aa)
            
  0.753
DR97_5073
Terminase (119 aa)
            
  0.717
DR97_2558
annotation not available (302 aa)
 
          0.643
dusA
tRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily (312 aa)
            
  0.576
adhA3
annotation not available (353 aa)
   
 
  0.554
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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