Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2629 | DR97_2660 | DR97_2629 | DR97_2660 | annotation not available | annotation not available | 0.479 |
DR97_2629 | HemY | DR97_2629 | DR97_2628 | annotation not available | annotation not available | 0.994 |
DR97_2629 | algR | DR97_2629 | DR97_2632 | annotation not available | Two-component system, lyttr family, response regulator algr; Positive regulator of the algD gene, which codes for a GDP- mannose dehydrogenase, a key step enzyme in the alginate biosynthesis pathway | 0.689 |
DR97_2629 | algZ | DR97_2629 | DR97_2633 | annotation not available | annotation not available | 0.667 |
DR97_2629 | dsbB1 | DR97_2629 | DR97_2627 | annotation not available | Disulfide bond formation dsbb family protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (By similarity) | 0.716 |
DR97_2629 | hemC | DR97_2629 | DR97_2631 | annotation not available | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps | 0.950 |
DR97_2629 | hemD | DR97_2629 | DR97_2630 | annotation not available | Uroporphyrinogen-iii synthase hemd family protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III | 0.994 |
DR97_2629 | hemF | DR97_2629 | DR97_2977 | annotation not available | Coproporphyrinogen-iii oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX | 0.609 |
DR97_2660 | DR97_2629 | DR97_2660 | DR97_2629 | annotation not available | annotation not available | 0.479 |
DR97_2660 | HemY | DR97_2660 | DR97_2628 | annotation not available | annotation not available | 0.706 |
HemY | DR97_2629 | DR97_2628 | DR97_2629 | annotation not available | annotation not available | 0.994 |
HemY | DR97_2660 | DR97_2628 | DR97_2660 | annotation not available | annotation not available | 0.706 |
HemY | algR | DR97_2628 | DR97_2632 | annotation not available | Two-component system, lyttr family, response regulator algr; Positive regulator of the algD gene, which codes for a GDP- mannose dehydrogenase, a key step enzyme in the alginate biosynthesis pathway | 0.696 |
HemY | algZ | DR97_2628 | DR97_2633 | annotation not available | annotation not available | 0.667 |
HemY | dsbB1 | DR97_2628 | DR97_2627 | annotation not available | Disulfide bond formation dsbb family protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (By similarity) | 0.733 |
HemY | hemC | DR97_2628 | DR97_2631 | annotation not available | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps | 0.950 |
HemY | hemD | DR97_2628 | DR97_2630 | annotation not available | Uroporphyrinogen-iii synthase hemd family protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III | 0.970 |
HemY | hemF | DR97_2628 | DR97_2977 | annotation not available | Coproporphyrinogen-iii oxidase, aerobic; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX | 0.695 |
HemY | hemL | DR97_2628 | DR97_3888 | annotation not available | hemL: glutamate-1-semialdehyde-2,1-aminomutase | 0.728 |
HemY | ubiH | DR97_2628 | DR97_2592 | annotation not available | ubiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase | 0.810 |
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