hcpA protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

hcpA

annotation not available (172 aa)

Predicted Functional Partners:

DR97_3225

0.905

DR97_230

0.881

DR97_2637

0.881

DR97_231

0.855

DR97_229

0.840

DR97_223

0.825

DR97_510

0.807

DR97_228

0.806

DR97_227

0.805

DR97_232

0.801

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_223	DR97_227	DR97_223	DR97_227	annotation not available	Type vi secretion system protein imph; Uncharacterized protein	0.960
DR97_223	DR97_228	DR97_223	DR97_228	annotation not available	Type vi secretion system protein impg; Uncharacterized protein	0.954
DR97_223	DR97_229	DR97_223	DR97_229	annotation not available	annotation not available	0.933
DR97_223	DR97_230	DR97_223	DR97_230	annotation not available	Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family	0.863
DR97_223	DR97_231	DR97_223	DR97_231	annotation not available	Type vi secretion system protein impb; Uncharacterized protein	0.890
DR97_223	DR97_232	DR97_223	DR97_232	annotation not available	Type vi secretion system protein vasj; impA-related N-terminal family protein	0.913
DR97_223	DR97_2637	DR97_223	DR97_2637	annotation not available	Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein	0.816
DR97_223	DR97_3225	DR97_223	DR97_3225	annotation not available	annotation not available	0.826
DR97_223	DR97_510	DR97_223	DR97_510	annotation not available	annotation not available	0.923
DR97_223	hcpA	DR97_223	DR97_2638	annotation not available	annotation not available	0.825
DR97_227	DR97_223	DR97_227	DR97_223	Type vi secretion system protein imph; Uncharacterized protein	annotation not available	0.960
DR97_227	DR97_228	DR97_227	DR97_228	Type vi secretion system protein imph; Uncharacterized protein	Type vi secretion system protein impg; Uncharacterized protein	0.988
DR97_227	DR97_229	DR97_227	DR97_229	Type vi secretion system protein imph; Uncharacterized protein	annotation not available	0.959
DR97_227	DR97_230	DR97_227	DR97_230	Type vi secretion system protein imph; Uncharacterized protein	Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family	0.917
DR97_227	DR97_231	DR97_227	DR97_231	Type vi secretion system protein imph; Uncharacterized protein	Type vi secretion system protein impb; Uncharacterized protein	0.938
DR97_227	DR97_232	DR97_227	DR97_232	Type vi secretion system protein imph; Uncharacterized protein	Type vi secretion system protein vasj; impA-related N-terminal family protein	0.917
DR97_227	DR97_2637	DR97_227	DR97_2637	Type vi secretion system protein imph; Uncharacterized protein	Type vi secretion system secreted protein vgrg; vgr_GE: Rhs element Vgr family protein	0.806
DR97_227	DR97_3225	DR97_227	DR97_3225	Type vi secretion system protein imph; Uncharacterized protein	annotation not available	0.811
DR97_227	DR97_510	DR97_227	DR97_510	Type vi secretion system protein imph; Uncharacterized protein	annotation not available	0.801
DR97_227	hcpA	DR97_227	DR97_2638	Type vi secretion system protein imph; Uncharacterized protein	annotation not available	0.805

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