Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BetT | DR97_2660 | DR97_2662 | DR97_2660 | Transporter, betaine/carnitine/choline transporter family protein; Belongs to the BCCT transporter (TC 2.A.15) family | annotation not available | 0.472 |
BetT | DR97_2661 | DR97_2662 | DR97_2661 | Transporter, betaine/carnitine/choline transporter family protein; Belongs to the BCCT transporter (TC 2.A.15) family | annotation not available | 0.567 |
DR97_2629 | DR97_2660 | DR97_2629 | DR97_2660 | annotation not available | annotation not available | 0.479 |
DR97_2629 | HemY | DR97_2629 | DR97_2628 | annotation not available | annotation not available | 0.994 |
DR97_2629 | recO | DR97_2629 | DR97_1211 | annotation not available | Dna repair protein reco (recombination protein o); Involved in DNA repair and RecF pathway recombination | 0.478 |
DR97_2660 | BetT | DR97_2660 | DR97_2662 | annotation not available | Transporter, betaine/carnitine/choline transporter family protein; Belongs to the BCCT transporter (TC 2.A.15) family | 0.472 |
DR97_2660 | DR97_2629 | DR97_2660 | DR97_2629 | annotation not available | annotation not available | 0.479 |
DR97_2660 | DR97_2661 | DR97_2660 | DR97_2661 | annotation not available | annotation not available | 0.752 |
DR97_2660 | DR97_471 | DR97_2660 | DR97_471 | annotation not available | Hypothetical protein; DUF883 domain-containing protein | 0.476 |
DR97_2660 | HemY | DR97_2660 | DR97_2628 | annotation not available | annotation not available | 0.706 |
DR97_2660 | YbiT | DR97_2660 | DR97_5884 | annotation not available | annotation not available | 0.408 |
DR97_2660 | YfjF | DR97_2660 | DR97_2110 | annotation not available | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.604 |
DR97_2660 | dsbD1 | DR97_2660 | DR97_2196 | annotation not available | Cytochrome c biogenesis transmembrane region family protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps | 0.413 |
DR97_2660 | metH | DR97_2660 | DR97_34 | annotation not available | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.514 |
DR97_2660 | recO | DR97_2660 | DR97_1211 | annotation not available | Dna repair protein reco (recombination protein o); Involved in DNA repair and RecF pathway recombination | 0.640 |
DR97_2661 | BetT | DR97_2661 | DR97_2662 | annotation not available | Transporter, betaine/carnitine/choline transporter family protein; Belongs to the BCCT transporter (TC 2.A.15) family | 0.567 |
DR97_2661 | DR97_2660 | DR97_2661 | DR97_2660 | annotation not available | annotation not available | 0.752 |
DR97_2661 | metH | DR97_2661 | DR97_34 | annotation not available | 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.468 |
DR97_471 | DR97_2660 | DR97_471 | DR97_2660 | Hypothetical protein; DUF883 domain-containing protein | annotation not available | 0.476 |
HemY | DR97_2629 | DR97_2628 | DR97_2629 | annotation not available | annotation not available | 0.994 |
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