STRINGSTRING
ivy_1 protein (Pseudomonas aeruginosa) - STRING interaction network
"ivy_1" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ivy_1annotation not available (155 aa)    
Predicted Functional Partners:
DR97_2860
UPF0391 membrane protein AO896_26960 (53 aa)
   
        0.932
DR97_4144
DUF3509 domain-containing protein (94 aa)
   
          0.629
yeiU
annotation not available (267 aa)
   
          0.627
DR97_1000
annotation not available (63 aa)
   
          0.616
DR97_5175
Uncharacterized protein (163 aa)
   
          0.611
DR97_1891
annotation not available (125 aa)
   
          0.591
DR97_1522
Amidase (111 aa)
   
          0.567
DR97_1947
Uncharacterized protein (68 aa)
   
          0.549
algK
annotation not available (475 aa)
   
          0.526
DR97_4894
Putative membrane protein (107 aa)
   
          0.517
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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