Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1288 | DR97_5029 | DR97_1288 | DR97_5029 | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | annotation not available | 0.748 |
DR97_1288 | DR97_6024 | DR97_1288 | DR97_6024 | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | annotation not available | 0.726 |
DR97_1288 | DR97_6025 | DR97_1288 | DR97_6025 | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | annotation not available | 0.925 |
DR97_1288 | znuB | DR97_1288 | DR97_2879 | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | annotation not available | 0.726 |
DR97_1288 | znuC | DR97_1288 | DR97_2878 | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | Zinc transport system atp-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system | 0.925 |
DR97_2661 | znuB | DR97_2661 | DR97_2879 | annotation not available | annotation not available | 0.744 |
DR97_2880 | ZnuA | DR97_2880 | DR97_2876 | annotation not available | annotation not available | 0.596 |
DR97_2880 | np20 | DR97_2880 | DR97_2877 | annotation not available | Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family | 0.757 |
DR97_2880 | znuB | DR97_2880 | DR97_2879 | annotation not available | annotation not available | 0.732 |
DR97_2880 | znuC | DR97_2880 | DR97_2878 | annotation not available | Zinc transport system atp-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system | 0.728 |
DR97_5029 | DR97_1288 | DR97_5029 | DR97_1288 | annotation not available | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | 0.748 |
DR97_5029 | DR97_6024 | DR97_5029 | DR97_6024 | annotation not available | annotation not available | 0.746 |
DR97_5029 | DR97_6025 | DR97_5029 | DR97_6025 | annotation not available | annotation not available | 0.703 |
DR97_5029 | znuB | DR97_5029 | DR97_2879 | annotation not available | annotation not available | 0.711 |
DR97_5029 | znuC | DR97_5029 | DR97_2878 | annotation not available | Zinc transport system atp-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system | 0.640 |
DR97_6024 | DR97_1288 | DR97_6024 | DR97_1288 | annotation not available | Hypothetical protein; DNA repair protein; recF/RecN/SMC N terminal domain protein | 0.726 |
DR97_6024 | DR97_5029 | DR97_6024 | DR97_5029 | annotation not available | annotation not available | 0.746 |
DR97_6024 | DR97_6025 | DR97_6024 | DR97_6025 | annotation not available | annotation not available | 0.999 |
DR97_6024 | DR97_6026 | DR97_6024 | DR97_6026 | annotation not available | Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family | 0.998 |
DR97_6024 | ZnuA | DR97_6024 | DR97_2876 | annotation not available | annotation not available | 0.966 |
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