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ybaL protein (Pseudomonas aeruginosa) - STRING interaction network
"ybaL" - Inner membrane protein ybaL in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybaLInner membrane protein ybaL; 2a37- transporter, monovalent cation-proton antiporter-2 family protein (567 aa)    
Predicted Functional Partners:
DR97_2895
Uncharacterized protein (194 aa)
              0.859
kefB
Glutathione-regulated potassium-efflux system protein KefB; 2a37- transporter, monovalent cation-proton antiporter-2 family protein (613 aa)
 
     
0.682
DR97_2043
annotation not available (520 aa)
              0.610
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (646 aa)
     
   
  0.581
cvrA
K(+)/H(+) antiporter NhaP2; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels (580 aa)
         
  0.554
yfbS
annotation not available (610 aa)
         
  0.543
amgS
annotation not available (439 aa)
     
 
  0.525
DR97_1335
annotation not available (571 aa)
 
     
0.518
pmrB
annotation not available (477 aa)
   
 
 
  0.515
recQ
recQ- ATP-dependent DNA helicase RecQ (712 aa)
   
        0.514
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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