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STRINGSTRING
pyrQ protein (Pseudomonas aeruginosa) - STRING interaction network
"pyrQ" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrQannotation not available (445 aa)    
Predicted Functional Partners:
pyrB
Asp_carb_tr- aspartate carbamoyltransferase; Belongs to the ATCase/OTCase family (334 aa)
  0.997
DR97_2919
annotation not available (186 aa)
 
        0.961
carB
CPSaseII_lrg- carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family (1073 aa)
 
 
  0.951
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (342 aa)
   
  0.951
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate (298 aa)
   
        0.944
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (232 aa)
   
   
  0.932
carA
CPSaseIIsmall- carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family (378 aa)
 
   
  0.924
pyrC'
Multifunctional complex type domain protein; pyrC_multi- dihydroorotase, multifunctional complex type domain protein (423 aa)
   
   
 
0.836
DR97_4415
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate (348 aa)
       
  0.825
amiA
annotation not available (397 aa)
   
        0.799
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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