STRINGSTRING
inaZ protein (Pseudomonas aeruginosa) - STRING interaction network
"inaZ" - Type VI secretion protein ImpA in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inaZType VI secretion protein ImpA; vgr_GE- Rhs element Vgr family protein (741 aa)    
Predicted Functional Partners:
DR97_3054
Uncharacterized protein (370 aa)
 
   
  0.942
DR97_3053
Uncharacterized protein (149 aa)
 
        0.929
DR97_3056
annotation not available (386 aa)
 
   
  0.925
DR97_3055
Beta-ketoacyl synthase, N-terminal domain protein (345 aa)
 
     
  0.916
DR97_3035
Uncharacterized protein; type_VI_ompA- type VI secretion system OmpA/MotB family protein (449 aa)
 
   
  0.874
DR97_3038
annotation not available (493 aa)
 
     
  0.858
DR97_3058
Uncharacterized protein (410 aa)
 
          0.855
DR97_3039
Type VI secretion-associated protein, ImpA family; impA-related N-terminal family protein (344 aa)
 
   
  0.823
DR97_3034
annotation not available (1176 aa)
 
     
  0.823
DR97_3036
Type VI secretion system-associated protein (444 aa)
 
   
  0.821
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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