pilH protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

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[Homology]

Score

pilH

annotation not available (121 aa)

Predicted Functional Partners:

pilJ

0.996

chpC

0.990

pilI

0.982

cyaB

0.974

chpA

0.971

pilK

0.941

chpB

0.931

cheY

0.912

pilT

0.875

pilG

0.872

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cheY	chpA	DR97_567	DR97_3381	annotation not available	annotation not available	0.883
cheY	chpB	DR97_567	DR97_3382	annotation not available	Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	0.811
cheY	chpC	DR97_567	DR97_3383	annotation not available	annotation not available	0.582
cheY	cyaB	DR97_567	DR97_4717	annotation not available	annotation not available	0.502
cheY	pilH	DR97_567	DR97_3377	annotation not available	annotation not available	0.912
cheY	pilJ	DR97_567	DR97_3379	annotation not available	annotation not available	0.849
cheY	pilK	DR97_567	DR97_3380	annotation not available	annotation not available	0.835
chpA	cheY	DR97_3381	DR97_567	annotation not available	annotation not available	0.883
chpA	chpB	DR97_3381	DR97_3382	annotation not available	Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	0.999
chpA	chpC	DR97_3381	DR97_3383	annotation not available	annotation not available	0.999
chpA	cyaB	DR97_3381	DR97_4717	annotation not available	annotation not available	0.928
chpA	pilG	DR97_3381	DR97_3376	annotation not available	annotation not available	0.962
chpA	pilH	DR97_3381	DR97_3377	annotation not available	annotation not available	0.971
chpA	pilI	DR97_3381	DR97_3378	annotation not available	annotation not available	0.998
chpA	pilJ	DR97_3381	DR97_3379	annotation not available	annotation not available	0.999
chpA	pilK	DR97_3381	DR97_3380	annotation not available	annotation not available	0.997
chpA	pilT	DR97_3381	DR97_3363	annotation not available	annotation not available	0.664
chpB	cheY	DR97_3382	DR97_567	Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	annotation not available	0.811
chpB	chpA	DR97_3382	DR97_3381	Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	annotation not available	0.999
chpB	chpC	DR97_3382	DR97_3383	Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR	annotation not available	0.986

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