Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2616 | rarD | DR97_2616 | DR97_3453 | Uncharacterized protein; Belongs to the UPF0178 family | annotation not available | 0.523 |
DR97_56 | rarD | DR97_56 | DR97_3453 | annotation not available | annotation not available | 0.404 |
DR97_5965 | rarD | DR97_5965 | DR97_3453 | annotation not available | annotation not available | 0.858 |
ModR | rarD | DR97_3455 | DR97_3453 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | annotation not available | 0.567 |
ModR | srkA | DR97_3455 | DR97_3454 | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | Phosphotransferase enzyme family protein; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response | 0.665 |
QacH | rarD | DR97_2344 | DR97_3453 | Small multidrug resistance family protein; Confers resistance to ethidium bromide, acriflavine and methyl viologen | annotation not available | 0.852 |
SugE | mdtJ | DR97_4666 | DR97_395 | annotation not available | annotation not available | 0.918 |
SugE | rarD | DR97_4666 | DR97_3453 | annotation not available | annotation not available | 0.861 |
Transporter | mdtJ | DR97_1197 | DR97_395 | annotation not available | annotation not available | 0.899 |
Transporter | rarD | DR97_1197 | DR97_3453 | annotation not available | annotation not available | 0.859 |
gpuP | rarD | DR97_3249 | DR97_3453 | Putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family | annotation not available | 0.671 |
mdtJ | SugE | DR97_395 | DR97_4666 | annotation not available | annotation not available | 0.918 |
mdtJ | Transporter | DR97_395 | DR97_1197 | annotation not available | annotation not available | 0.899 |
mdtJ | rarD | DR97_395 | DR97_3453 | annotation not available | annotation not available | 0.673 |
rarD | DR97_2616 | DR97_3453 | DR97_2616 | annotation not available | Uncharacterized protein; Belongs to the UPF0178 family | 0.523 |
rarD | DR97_56 | DR97_3453 | DR97_56 | annotation not available | annotation not available | 0.404 |
rarD | DR97_5965 | DR97_3453 | DR97_5965 | annotation not available | annotation not available | 0.858 |
rarD | ModR | DR97_3453 | DR97_3455 | annotation not available | Molybdenum transport regulator; modE_repress: ModE molybdate transport repressor domain protein | 0.567 |
rarD | QacH | DR97_3453 | DR97_2344 | annotation not available | Small multidrug resistance family protein; Confers resistance to ethidium bromide, acriflavine and methyl viologen | 0.852 |
rarD | SugE | DR97_3453 | DR97_4666 | annotation not available | annotation not available | 0.861 |
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