STRINGSTRING
nirF protein (Pseudomonas aeruginosa) - STRING interaction network
"nirF" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirFannotation not available (392 aa)    
Predicted Functional Partners:
nirL
annotation not available (174 aa)
 
   
  0.998
nirJ
rSAM_NirJ- heme d1 biosynthesis radical SAM protein NirJ (387 aa)
   
  0.998
nirD1
annotation not available (150 aa)
 
        0.989
nirE
Methyltransferase; cobA_cysG_Cterm- uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family (279 aa)
   
   
  0.988
nirG
annotation not available (147 aa)
 
        0.987
nirC
annotation not available (119 aa)
 
 
  0.980
nirH
annotation not available (171 aa)
 
        0.977
nirM
annotation not available (104 aa)
 
   
  0.968
nirN
annotation not available (493 aa)
 
 
0.965
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family (636 aa)
 
   
  0.921
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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