Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_3547 | dnaG | DR97_3547 | DR97_3546 | annotation not available | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | 0.748 |
| DR97_3547 | gatB | DR97_3547 | DR97_1663 | annotation not available | Aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit b; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) | 0.437 |
| DR97_3547 | prs | DR97_3547 | DR97_1980 | annotation not available | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P) | 0.448 |
| DR97_3547 | ribB | DR97_3547 | DR97_3813 | annotation not available | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate | 0.832 |
| DR97_3547 | rpoD | DR97_3547 | DR97_3545 | annotation not available | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | 0.648 |
| DR97_3547 | rpsU | DR97_3547 | DR97_3548 | annotation not available | Small subunit ribosomal protein s21; Belongs to the bacterial ribosomal protein bS21 family | 0.786 |
| DR97_3547 | soj | DR97_3547 | DR97_2942 | annotation not available | annotation not available | 0.483 |
| DR97_3547 | tsaD | DR97_3547 | DR97_3549 | annotation not available | Trna threonylcarbamoyl adenosine modification protein ygjd; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | 0.655 |
| dnaG | DR97_3547 | DR97_3546 | DR97_3547 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | annotation not available | 0.748 |
| dnaG | rpoD | DR97_3546 | DR97_3545 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | 0.948 |
| dnaG | rpsU | DR97_3546 | DR97_3548 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Small subunit ribosomal protein s21; Belongs to the bacterial ribosomal protein bS21 family | 0.840 |
| dnaG | tsaD | DR97_3546 | DR97_3549 | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | Trna threonylcarbamoyl adenosine modification protein ygjd; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | 0.787 |
| gatB | DR97_3547 | DR97_1663 | DR97_3547 | Aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit b; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln) | annotation not available | 0.437 |
| prs | DR97_3547 | DR97_1980 | DR97_3547 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P) | annotation not available | 0.448 |
| ribB | DR97_3547 | DR97_3813 | DR97_3547 | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate | annotation not available | 0.832 |
| rpoD | DR97_3547 | DR97_3545 | DR97_3547 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | annotation not available | 0.648 |
| rpoD | dnaG | DR97_3545 | DR97_3546 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | Dna primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication | 0.948 |
| rpoD | rpsU | DR97_3545 | DR97_3548 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | Small subunit ribosomal protein s21; Belongs to the bacterial ribosomal protein bS21 family | 0.750 |
| rpoD | tsaD | DR97_3545 | DR97_3549 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth | Trna threonylcarbamoyl adenosine modification protein ygjd; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction | 0.687 |
| rpsU | DR97_3547 | DR97_3548 | DR97_3547 | Small subunit ribosomal protein s21; Belongs to the bacterial ribosomal protein bS21 family | annotation not available | 0.786 |
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