STRINGSTRING
DR97_3760 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3760" - Ribosomal protein S3AE in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3760Ribosomal protein S3AE (132 aa)    
Predicted Functional Partners:
ampC
annotation not available (397 aa)
              0.647
DR97_462
annotation not available (207 aa)
   
          0.515
DR97_5980
YgdI/YgdR family lipoprotein (73 aa)
   
          0.495
ygdR
YgdI/YgdR family lipoprotein (73 aa)
   
          0.469
DR97_3020
Putative aminopeptidase (336 aa)
   
          0.462
ampR
annotation not available (296 aa)
              0.448
wspD
annotation not available (229 aa)
   
          0.445
DR97_5040
Uncharacterized protein (113 aa)
   
          0.422
DR97_25
Uncharacterized protein (91 aa)
   
          0.420
DR97_5483
annotation not available (555 aa)
   
          0.413
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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