Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amidase | DR97_1518 | DR97_1413 | DR97_1518 | annotation not available | annotation not available | 0.834 |
Amidase | StyD | DR97_1413 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.905 |
Amidase | amiE | DR97_1413 | DR97_4561 | annotation not available | Acylamide amidohydrolase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia. Enables the organism to use acetamide as both carbon and nitrogen source | 0.834 |
Amidase | hppD | DR97_1413 | DR97_1078 | annotation not available | 4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family | 0.800 |
Amidase | quiC1 | DR97_1413 | DR97_3199 | annotation not available | Xylose isomerase-like tim barrel family protein; Catalyzes the conversion of 3-dehydroshikimate to protocatechuate (3,4-dihydroxybenzoate), a common intermediate of quinate and shikimate degradation pathways. Is required for growth on either quinate or shikimate as a sole carbon source | 0.831 |
DR97_1518 | Amidase | DR97_1518 | DR97_1413 | annotation not available | annotation not available | 0.834 |
DR97_1518 | StyD | DR97_1518 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.905 |
DR97_1518 | amiE | DR97_1518 | DR97_4561 | annotation not available | Acylamide amidohydrolase; Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia. Enables the organism to use acetamide as both carbon and nitrogen source | 0.809 |
DR97_1518 | hppD | DR97_1518 | DR97_1078 | annotation not available | 4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family | 0.800 |
DR97_1518 | quiC1 | DR97_1518 | DR97_3199 | annotation not available | Xylose isomerase-like tim barrel family protein; Catalyzes the conversion of 3-dehydroshikimate to protocatechuate (3,4-dihydroxybenzoate), a common intermediate of quinate and shikimate degradation pathways. Is required for growth on either quinate or shikimate as a sole carbon source | 0.807 |
DR97_3389 | StyD | DR97_3389 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.907 |
DR97_3795 | StyD | DR97_3795 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.531 |
DR97_5694 | StyD | DR97_5694 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.673 |
DR97_768 | StyD | DR97_768 | DR97_3794 | annotation not available | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | 0.681 |
StyD | Amidase | DR97_3794 | DR97_1413 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.905 |
StyD | DR97_1518 | DR97_3794 | DR97_1518 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.905 |
StyD | DR97_3389 | DR97_3794 | DR97_3389 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.907 |
StyD | DR97_3795 | DR97_3794 | DR97_3795 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.531 |
StyD | DR97_5694 | DR97_3794 | DR97_5694 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.673 |
StyD | DR97_768 | DR97_3794 | DR97_768 | Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family | annotation not available | 0.681 |
page 1 of 3