Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3882 | DR97_3884 | DR97_3882 | DR97_3884 | annotation not available | annotation not available | 0.954 |
DR97_3882 | lnt | DR97_3882 | DR97_3881 | annotation not available | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.796 |
DR97_3882 | ybeY | DR97_3882 | DR97_3883 | annotation not available | Putative rrna maturation factor ybey; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA | 0.963 |
DR97_3884 | DR97_3882 | DR97_3884 | DR97_3882 | annotation not available | annotation not available | 0.954 |
DR97_3884 | lnt | DR97_3884 | DR97_3881 | annotation not available | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.883 |
DR97_3884 | ybeY | DR97_3884 | DR97_3883 | annotation not available | Putative rrna maturation factor ybey; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA | 0.999 |
DR97_5568 | LolC | DR97_5568 | DR97_4951 | annotation not available | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | 0.478 |
DR97_5568 | LolE | DR97_5568 | DR97_4953 | annotation not available | lolCE: liporeleasing system, transmembrane , LolC/E family protein | 0.546 |
DR97_5568 | lgt | DR97_5568 | DR97_3307 | annotation not available | Phosphatidylglycerol---prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins | 0.916 |
DR97_5568 | lnt | DR97_5568 | DR97_3881 | annotation not available | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.912 |
DR97_5568 | lolA | DR97_5568 | DR97_5348 | annotation not available | Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) | 0.899 |
DR97_5568 | lolB | DR97_5568 | DR97_1977 | annotation not available | Outer membrane lipoprotein lolb; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein | 0.878 |
LolC | DR97_5568 | DR97_4951 | DR97_5568 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | annotation not available | 0.478 |
LolC | LolE | DR97_4951 | DR97_4953 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | lolCE: liporeleasing system, transmembrane , LolC/E family protein | 0.946 |
LolC | lgt | DR97_4951 | DR97_3307 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | Phosphatidylglycerol---prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins | 0.470 |
LolC | lnt | DR97_4951 | DR97_3881 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | Apolipoprotein n-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation | 0.835 |
LolC | lolA | DR97_4951 | DR97_5348 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) | 0.980 |
LolC | lolB | DR97_4951 | DR97_1977 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | Outer membrane lipoprotein lolb; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein | 0.955 |
LolC | lspA | DR97_4951 | DR97_1863 | Hypothetical protein; lolCE: liporeleasing system, transmembrane , LolC/E family protein | Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins | 0.549 |
LolE | DR97_5568 | DR97_4953 | DR97_5568 | lolCE: liporeleasing system, transmembrane , LolC/E family protein | annotation not available | 0.546 |
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