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DR97_3900 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_3900" - DUF2788 domain-containing protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_3900DUF2788 domain-containing protein (69 aa)    
Predicted Functional Partners:
DR97_3899
Globin (130 aa)
              0.643
DR97_5146
annotation not available (160 aa)
   
          0.624
DR97_990
Uncharacterized protein (139 aa)
   
          0.544
DR97_3901
annotation not available (159 aa)
              0.528
DR97_1713
annotation not available (229 aa)
   
          0.516
DR97_3066
Twin transmembrane helix small protein (69 aa)
   
          0.515
rssB
annotation not available (394 aa)
   
          0.506
DR97_4849
annotation not available (326 aa)
   
          0.481
DR97_4189
Pilin assembly protein (114 aa)
   
          0.430
DR97_2067
annotation not available (58 aa)
   
          0.410
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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