Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3613 | napA | DR97_3613 | DR97_760 | annotation not available | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | 0.900 |
DR97_3613 | narG | DR97_3613 | DR97_3994 | annotation not available | Nitrate reductase / nitrite oxidoreductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.901 |
DR97_3613 | narH | DR97_3613 | DR97_3995 | annotation not available | Nitrate reductase / nitrite oxidoreductase, beta subunit; narH: nitrate reductase, beta subunit | 0.901 |
DR97_3613 | narI | DR97_3613 | DR97_3997 | annotation not available | narI: respiratory nitrate reductase, gamma subunit | 0.907 |
DR97_3613 | narK1 | DR97_3613 | DR97_3992 | annotation not available | annotation not available | 0.903 |
DR97_3613 | narK2 | DR97_3613 | DR97_3993 | annotation not available | annotation not available | 0.903 |
DR97_3613 | nirB | DR97_3613 | DR97_105 | annotation not available | Assimilatory nitrite reductase large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family | 0.906 |
DR97_3613 | nirD | DR97_3613 | DR97_106 | annotation not available | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.900 |
DR97_3613 | nirS | DR97_3613 | DR97_3487 | annotation not available | annotation not available | 0.902 |
napA | DR97_3613 | DR97_760 | DR97_3613 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | annotation not available | 0.900 |
napA | narG | DR97_760 | DR97_3994 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | Nitrate reductase / nitrite oxidoreductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | 0.971 |
napA | narH | DR97_760 | DR97_3995 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | Nitrate reductase / nitrite oxidoreductase, beta subunit; narH: nitrate reductase, beta subunit | 0.877 |
napA | narI | DR97_760 | DR97_3997 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | narI: respiratory nitrate reductase, gamma subunit | 0.818 |
napA | narJ | DR97_760 | DR97_3996 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | narJ: nitrate reductase molybdenum cofactor assembly chaperone | 0.697 |
napA | narK1 | DR97_760 | DR97_3992 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | annotation not available | 0.918 |
napA | narK2 | DR97_760 | DR97_3993 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | annotation not available | 0.929 |
napA | nirB | DR97_760 | DR97_105 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | Assimilatory nitrite reductase large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family | 0.953 |
napA | nirD | DR97_760 | DR97_106 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit | 0.921 |
napA | nirS | DR97_760 | DR97_3487 | Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite | annotation not available | 0.981 |
narG | DR97_3613 | DR97_3994 | DR97_3613 | Nitrate reductase / nitrite oxidoreductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | annotation not available | 0.901 |
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