STRINGSTRING
hcnC_1 protein (Pseudomonas aeruginosa) - STRING interaction network
"hcnC_1" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcnC_1annotation not available (375 aa)    
Predicted Functional Partners:
DR97_4004
annotation not available (315 aa)
 
 
  0.995
sbnA
annotation not available (365 aa)
   
   
  0.877
cysM
cysM- cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family (299 aa)
     
   
  0.857
DR97_4002
annotation not available (210 aa)
 
        0.818
soxA
soxA- sarcosine oxidase, alpha subunit; Belongs to the GcvT family (1005 aa)
   
 
  0.534
rhlB
ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA; Belongs to the DEAD box helicase family. RhlB subfamily (507 aa)
     
      0.502
cysK
cysK- cysteine synthase A (324 aa)
     
   
  0.475
soxD
annotation not available (106 aa)
     
      0.443
DR97_1946
Putative membrane protein (92 aa)
   
          0.435
DR97_2331
annotation not available (696 aa)
 
     
  0.432
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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