STRINGSTRING
rlmF protein (Pseudomonas aeruginosa) - STRING interaction network
"rlmF" - Ribosomal RNA large subunit methyltransferase F in Pseudomonas aeruginosa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rlmFRibosomal RNA large subunit methyltransferase F; Specifically methylates the adenine in position 1618 of 23S rRNA (336 aa)    
Predicted Functional Partners:
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (278 aa)
           
  0.871
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (268 aa)
     
   
  0.868
yfbS
annotation not available (610 aa)
              0.589
ygjP
Metal-dependent hydrolase (162 aa)
 
          0.584
DR97_2146
annotation not available (266 aa)
     
   
  0.561
rlmN
Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (379 aa)
           
  0.546
yscY
annotation not available (109 aa)
     
        0.520
DR97_176
annotation not available (81 aa)
     
        0.517
pscO
annotation not available (158 aa)
     
        0.510
tyeA
annotation not available (92 aa)
     
        0.510
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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