STRINGSTRING
yfbS protein (Pseudomonas aeruginosa) - STRING interaction network
"yfbS" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbSannotation not available (610 aa)    
Predicted Functional Partners:
phaAB
annotation not available (933 aa)
         
  0.831
trkA
annotation not available (457 aa)
         
  0.815
kefB
Glutathione-regulated potassium-efflux system protein KefB; 2a37- transporter, monovalent cation-proton antiporter-2 family protein (613 aa)
   
   
  0.757
arsB3
Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump (427 aa)
   
   
  0.752
cysN/C
Multifunctional fusion protein; Catalyzes the synthesis of activated sulfate; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily (633 aa)
       
  0.739
fumA
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
     
 
  0.715
phaE
annotation not available (174 aa)
         
  0.675
gpsA
annotation not available (340 aa)
   
        0.639
morA
Motility regulator; GGDEF- diguanylate cyclase domain protein (1415 aa)
   
   
  0.631
aefA
annotation not available (1118 aa)
 
 
      0.619
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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