Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CheA | DR97_565 | DR97_3134 | DR97_565 | annotation not available | annotation not available | 0.907 |
CheA | cheB3 | DR97_3134 | DR97_4174 | annotation not available | Two-component system, chemotaxis family, response regulator wspf; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid | 0.996 |
CheA | cheR2 | DR97_3134 | DR97_3131 | annotation not available | Cher methyltransferase, all-alpha domain protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP | 0.999 |
CheA | chpA | DR97_3134 | DR97_3381 | annotation not available | annotation not available | 0.778 |
CheA | wspA | DR97_3134 | DR97_4169 | annotation not available | annotation not available | 0.981 |
CheA | wspB | DR97_3134 | DR97_4170 | annotation not available | annotation not available | 0.995 |
CheA | wspC | DR97_3134 | DR97_4171 | annotation not available | Cher methyltransferase, sam binding domain protein; Involved in biofilm formation | 0.992 |
CheA | wspD | DR97_3134 | DR97_4172 | annotation not available | annotation not available | 0.992 |
CheA | wspE | DR97_3134 | DR97_4173 | annotation not available | annotation not available | 0.996 |
CheA | wspR | DR97_3134 | DR97_4175 | annotation not available | Two-component system, chemotaxis family, response regulator wspr; Two-component response regulator; GGDEF: diguanylate cyclase domain protein | 0.621 |
DR97_565 | CheA | DR97_565 | DR97_3134 | annotation not available | annotation not available | 0.907 |
DR97_565 | cheB3 | DR97_565 | DR97_4174 | annotation not available | Two-component system, chemotaxis family, response regulator wspf; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid | 0.995 |
DR97_565 | cheR2 | DR97_565 | DR97_3131 | annotation not available | Cher methyltransferase, all-alpha domain protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP | 0.996 |
DR97_565 | chpA | DR97_565 | DR97_3381 | annotation not available | annotation not available | 0.811 |
DR97_565 | wspA | DR97_565 | DR97_4169 | annotation not available | annotation not available | 0.979 |
DR97_565 | wspB | DR97_565 | DR97_4170 | annotation not available | annotation not available | 0.995 |
DR97_565 | wspC | DR97_565 | DR97_4171 | annotation not available | Cher methyltransferase, sam binding domain protein; Involved in biofilm formation | 0.990 |
DR97_565 | wspD | DR97_565 | DR97_4172 | annotation not available | annotation not available | 0.992 |
DR97_565 | wspE | DR97_565 | DR97_4173 | annotation not available | annotation not available | 0.996 |
DR97_565 | wspR | DR97_565 | DR97_4175 | annotation not available | Two-component system, chemotaxis family, response regulator wspr; Two-component response regulator; GGDEF: diguanylate cyclase domain protein | 0.630 |
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