DR97_4198 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

DR97_4198

annotation not available (425 aa)

Predicted Functional Partners:

rsmJ

0.770

CYP107B1

0.679

DR97_5700

0.656

DR97_4195

0.627

DR97_6131

0.599

DR97_4196

0.591

rhlB3

0.585

DR97_4600

0.581

DR97_4597

0.564

pvdL

0.562

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYP107B1	DR97_4198	DR97_4596	DR97_4198	P450 107B1; Belongs to the cytochrome P450 family	annotation not available	0.679
CYP107B1	DR97_4597	DR97_4596	DR97_4597	P450 107B1; Belongs to the cytochrome P450 family	annotation not available	0.937
CYP107B1	DR97_4600	DR97_4596	DR97_4600	P450 107B1; Belongs to the cytochrome P450 family	AA-adenyl-dom- amino acid adenylation domain protein	0.967
CYP107B1	DR97_6131	DR97_4596	DR97_6131	P450 107B1; Belongs to the cytochrome P450 family	Uncharacterized protein; fkbM_fam- methyltransferase, FkbM family domain protein	0.656
CYP107B1	pvdL	DR97_4596	DR97_6009	P450 107B1; Belongs to the cytochrome P450 family	Uncharacterized protein; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1	0.573
CYP107B1	rhlB3	DR97_4596	DR97_4443	P450 107B1; Belongs to the cytochrome P450 family	Rhamnosyltransferase chain B; Glycosyltransferase family 28 N-terminal domain protein	0.545
DR97_4195	DR97_4196	DR97_4195	DR97_4196	annotation not available	annotation not available	0.891
DR97_4195	DR97_4198	DR97_4195	DR97_4198	annotation not available	annotation not available	0.627
DR97_4195	rsmJ	DR97_4195	DR97_4197	annotation not available	Ribosomal RNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA	0.706
DR97_4196	DR97_4195	DR97_4196	DR97_4195	annotation not available	annotation not available	0.891
DR97_4196	DR97_4198	DR97_4196	DR97_4198	annotation not available	annotation not available	0.591
DR97_4196	rsmJ	DR97_4196	DR97_4197	annotation not available	Ribosomal RNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA	0.672
DR97_4198	CYP107B1	DR97_4198	DR97_4596	annotation not available	P450 107B1; Belongs to the cytochrome P450 family	0.679
DR97_4198	DR97_4195	DR97_4198	DR97_4195	annotation not available	annotation not available	0.627
DR97_4198	DR97_4196	DR97_4198	DR97_4196	annotation not available	annotation not available	0.591
DR97_4198	DR97_4597	DR97_4198	DR97_4597	annotation not available	annotation not available	0.564
DR97_4198	DR97_4600	DR97_4198	DR97_4600	annotation not available	AA-adenyl-dom- amino acid adenylation domain protein	0.581
DR97_4198	DR97_5700	DR97_4198	DR97_5700	annotation not available	Uncharacterized protein; P450 107B1; Belongs to the cytochrome P450 family	0.656
DR97_4198	DR97_6131	DR97_4198	DR97_6131	annotation not available	Uncharacterized protein; fkbM_fam- methyltransferase, FkbM family domain protein	0.599
DR97_4198	pvdL	DR97_4198	DR97_6009	annotation not available	Uncharacterized protein; D-ala-DACP-lig- D-alanine--poly(phosphoribitol) ligase, subunit 1	0.562

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