puuP1 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

puuP1

annotation not available (440 aa)

Predicted Functional Partners:

ramA

0.810

DR97_4344

0.807

mgtC

0.527

DR97_4340

0.515

DR97_6117

0.511

DR97_787

0.491

DR97_4604

0.477

DR97_4343

0.468

DR97_4159

0.450

DR97_6145

0.428

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_4159	DR97_6145	DR97_4159	DR97_6145	annotation not available	annotation not available	0.422
DR97_4159	puuP1	DR97_4159	DR97_4342	annotation not available	annotation not available	0.450
DR97_4340	puuP1	DR97_4340	DR97_4342	annotation not available	annotation not available	0.515
DR97_4340	ramA	DR97_4340	DR97_4341	annotation not available	annotation not available	0.865
DR97_4343	DR97_4344	DR97_4343	DR97_4344	annotation not available	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	0.489
DR97_4343	puuP1	DR97_4343	DR97_4342	annotation not available	annotation not available	0.468
DR97_4344	DR97_4343	DR97_4344	DR97_4343	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	annotation not available	0.489
DR97_4344	DR97_6117	DR97_4344	DR97_6117	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	annotation not available	0.505
DR97_4344	mgtC	DR97_4344	DR97_1942	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	annotation not available	0.455
DR97_4344	puuP1	DR97_4344	DR97_4342	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	annotation not available	0.807
DR97_4344	ramA	DR97_4344	DR97_4341	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	annotation not available	0.616
DR97_4604	puuP1	DR97_4604	DR97_4342	annotation not available	annotation not available	0.477
DR97_4604	ramA	DR97_4604	DR97_4341	annotation not available	annotation not available	0.429
DR97_6117	DR97_4344	DR97_6117	DR97_4344	annotation not available	Uncharacterized protein; Ogt: methylated-DNA-[]-cysteine S-methyltransferase family protein	0.505
DR97_6117	DR97_787	DR97_6117	DR97_787	annotation not available	annotation not available	0.502
DR97_6117	puuP1	DR97_6117	DR97_4342	annotation not available	annotation not available	0.511
DR97_6117	ramA	DR97_6117	DR97_4341	annotation not available	annotation not available	0.439
DR97_6145	DR97_4159	DR97_6145	DR97_4159	annotation not available	annotation not available	0.422
DR97_6145	mgtC	DR97_6145	DR97_1942	annotation not available	annotation not available	0.503
DR97_6145	puuP1	DR97_6145	DR97_4342	annotation not available	annotation not available	0.428

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