STRINGSTRING
imm protein (Pseudomonas aeruginosa) - STRING interaction network
"imm" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
immannotation not available (90 aa)    
Predicted Functional Partners:
DR97_4377
annotation not available (777 aa)
 
 
 
  0.997
pys1
Pyocin-S1; Causes breakdown of chromosomal DNA as well as complete inhibition of lipid synthesis in sensitive cells (618 aa)
 
     
  0.933
alx
R_switched_Alx- integral membrane , TerC family protein (347 aa)
           
  0.711
ugpQ
annotation not available (240 aa)
           
  0.568
DR97_4214
annotation not available (367 aa)
   
          0.526
DR97_5878
Putative secreted protein (79 aa)
   
          0.509
ycfJ
annotation not available (182 aa)
           
  0.439
bcpA
Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily (276 aa)
           
  0.435
DR97_3962
annotation not available (131 aa)
 
          0.431
yfdC
annotation not available (318 aa)
     
   
  0.421
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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