Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2429 | DR97_2520 | DR97_2429 | DR97_2520 | annotation not available | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.802 |
DR97_2429 | DR97_452 | DR97_2429 | DR97_452 | annotation not available | annotation not available | 0.578 |
DR97_2429 | DR97_6226 | DR97_2429 | DR97_6226 | annotation not available | annotation not available | 0.744 |
DR97_2429 | GltJ | DR97_2429 | DR97_453 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.881 |
DR97_2429 | GltK | DR97_2429 | DR97_454 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.897 |
DR97_2429 | YbeJ | DR97_2429 | DR97_2437 | annotation not available | annotation not available | 0.663 |
DR97_2429 | rbsC | DR97_2429 | DR97_5900 | annotation not available | Branched-chain amino acid transport system / permease component family protein; Belongs to the binding-protein-dependent transport system permease family | 0.618 |
DR97_2520 | DR97_2429 | DR97_2520 | DR97_2429 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.802 |
DR97_2520 | GlnQ | DR97_2520 | DR97_681 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.798 |
DR97_2520 | GltJ | DR97_2520 | DR97_453 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.736 |
DR97_2520 | GltK | DR97_2520 | DR97_454 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.796 |
DR97_2520 | GltL | DR97_2520 | DR97_455 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.785 |
DR97_2520 | YbeJ | DR97_2520 | DR97_2437 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.411 |
DR97_452 | DR97_2429 | DR97_452 | DR97_2429 | annotation not available | annotation not available | 0.578 |
DR97_452 | GlnQ | DR97_452 | DR97_681 | annotation not available | annotation not available | 0.593 |
DR97_452 | GltJ | DR97_452 | DR97_453 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.982 |
DR97_452 | GltK | DR97_452 | DR97_454 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.983 |
DR97_452 | GltL | DR97_452 | DR97_455 | annotation not available | annotation not available | 0.980 |
DR97_6226 | DR97_2429 | DR97_6226 | DR97_2429 | annotation not available | annotation not available | 0.744 |
DR97_6226 | GlnQ | DR97_6226 | DR97_681 | annotation not available | annotation not available | 0.767 |
page 1 of 4