dmlR_25 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

dmlR_25

annotation not available (306 aa)

Predicted Functional Partners:

gltX

0.795

DR97_4792

0.655

DR97_1409

0.615

mdr

0.610

DR97_5771

0.603

DR97_1166

0.585

DR97_4345

0.566

DR97_1167

0.559

DR97_2587

0.553

DR97_5705

0.541

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1166	DR97_1167	DR97_1166	DR97_1167	annotation not available	annotation not available	0.663
DR97_1166	DR97_1409	DR97_1166	DR97_1409	annotation not available	annotation not available	0.655
DR97_1166	DR97_2587	DR97_1166	DR97_2587	annotation not available	annotation not available	0.643
DR97_1166	DR97_4345	DR97_1166	DR97_4345	annotation not available	annotation not available	0.671
DR97_1166	DR97_5771	DR97_1166	DR97_5771	annotation not available	annotation not available	0.722
DR97_1166	dmlR_25	DR97_1166	DR97_4794	annotation not available	annotation not available	0.585
DR97_1167	DR97_1166	DR97_1167	DR97_1166	annotation not available	annotation not available	0.663
DR97_1167	DR97_5705	DR97_1167	DR97_5705	annotation not available	annotation not available	0.714
DR97_1167	dmlR_25	DR97_1167	DR97_4794	annotation not available	annotation not available	0.559
DR97_1409	DR97_1166	DR97_1409	DR97_1166	annotation not available	annotation not available	0.655
DR97_1409	DR97_5705	DR97_1409	DR97_5705	annotation not available	annotation not available	0.720
DR97_1409	DR97_5771	DR97_1409	DR97_5771	annotation not available	annotation not available	0.730
DR97_1409	dmlR_25	DR97_1409	DR97_4794	annotation not available	annotation not available	0.615
DR97_2587	DR97_1166	DR97_2587	DR97_1166	annotation not available	annotation not available	0.643
DR97_2587	dmlR_25	DR97_2587	DR97_4794	annotation not available	annotation not available	0.553
DR97_4345	DR97_1166	DR97_4345	DR97_1166	annotation not available	annotation not available	0.671
DR97_4345	dmlR_25	DR97_4345	DR97_4794	annotation not available	annotation not available	0.566
DR97_4792	dmlR_25	DR97_4792	DR97_4794	Uncharacterized protein; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily	annotation not available	0.655
DR97_4792	gltX	DR97_4792	DR97_4795	Uncharacterized protein; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily	Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)	0.528
DR97_4792	mdr	DR97_4792	DR97_4793	Uncharacterized protein; efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein; Belongs to the major facilitator superfamily	Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit	0.981

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